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Items: 4

1.

Role of Epigenetics in Unicellular to Multicellular Transition in Dictyostelium

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Dictyostelium discoideum; Dictyostelium discoideum AX4
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
4 related Platforms
117 Samples
Download data: H5, NARROWPEAK
Series
Accession:
GSE137604
ID:
200137604
2.

Determine the genome-wide localization of histone and histone marks in different stages of D. discoideum

(Submitter supplied) We report the chromatin immunoprecipitation followed by next generation sequencing (ChIP-seq) on H3, H3K4me1, H3K4me3, H3K9me3, H3K27ac, H3K27me3, and H3K36me3. ChIP-seq were sequenced to a depth of at least 8 million total reads/sample. We found that H3K4me3, H3K27ac and H3K4me1 show separation between unicellular and multicellular stages in principal component analysis (PCA); other marks were unable to show a clear separation in PCA.
Organism:
Dictyostelium discoideum
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL26360
64 Samples
Download data: NARROWPEAK
Series
Accession:
GSE137599
ID:
200137599
3.

Illumina NextSeq 500 (Dictyostelium discoideum)

Organism:
Dictyostelium discoideum
12 Series
361 Samples
Download data
Platform
Accession:
GPL26360
ID:
100026360
4.

M2_H3K36me3

Organism:
Dictyostelium discoideum
Source name:
Mound cells (AX4) replicate 2
Platform:
GPL26360
Series:
GSE137599 GSE137604
Download data: NARROWPEAK
Sample
Accession:
GSM4082940
ID:
304082940
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