GSM459602[Accession] - GEO DataSets

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Items: 3

Select item 2000184501.

Identification of StpA-binding sites on the Salmonella genome

(Submitter supplied) We used ChIP-chip analysis to identify where the nucleoid associated protein StpA binds on the Salmonella Typhimurium genome. We identified 285 chromosomal regions bound by StpA, ranging in size from 400 to 3500 base pairs and containing 572 genes. Comparison of the ChIP data revealed that StpA displayed an identical binding profile to H-NS; all genomic regions associated with StpA were also bound by H-NS. more...

Organism:: Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344; Salmonella enterica subsp. enterica serovar Typhimurium

Type:: Genome binding/occupancy profiling by genome tiling array

Platform:: GPL5791
8 Samples

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Accession:: GSE18450

ID:: 200018450

Select item 1000057912.

IFR OGT Salmonella SL1344 22k v1.0

(Submitter supplied) The microarrays were designed and produced by Oxford Gene Technology (Kidlington, UK). They consist of 21,939 60-mer oligonucleotides tiled throughout the S. Typhimurium SL1344 NCTC13347 genome and 636 control oligonucleotides. The S. Typhimurium SL1344 sequences were obtained from the Sanger Institute (Hinxton, UK) website (http://www.sanger.ac.uk/Projects/Salmonella/).