GSM6063443[Accession] - GEO DataSets - NCBI

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Items: 4

Select item 2001527341.

Genome-wide chromatin profiles of PBRM1 [RNA-Seq]

(Submitter supplied) PBRM1 is an accessory subunit of the PBAF subclass of the SWI/SNF chromatin remodeler. The inactivation of PBRM1 is the second most frequent mutational event in kidney tumorigenesis. Here we show that in VHL-deficient ccRCC tumors, PBRM1 loss results in an altered PBAF complex that retains the association between SMARCA4 and ARID2 but disengages BRD7 from SMARCA4. The PBRM1-deficient PBAF complexes redistribute from promoter proxy regions to distal enhancer regions. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL20795 GPL24676 GPL11154
41 Samples

Download data: TXT

Series

Accession:: GSE152734

ID:: 200152734

PubMed Similar studies Analyze with GEO2R SRA Run Selector

Select item 2001527352.

Genome-wide chromatin profiles of PBRM1

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing

5 related Platforms
170 Samples

Download data: BED, NARROWPEAK

Series

Accession:: GSE152735

ID:: 200152735

PubMed Similar studies

Select item 1000207953.

HiSeq X Ten (Homo sapiens)

Organism:: Homo sapiens

2074 Series
35702 Samples

Platform

Accession:: GPL20795

ID:: 100020795

Select item 3060634434.

769-P control 2 [SAM24314119]

Organism:: Homo sapiens

Source name:: Cancer cell line

Platform:: GPL20795
Series:: GSE152734 GSE152735

Sample

Accession:: GSM6063443

ID:: 306063443

SRA Run Selector

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