GSM8342317[Accession] - GEO DataSets

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Items: 3

Select item 2002704111.

Binding specificities of transcription factors of the oomycete Phytophthorainfestans reflect conserved and divergent evolutionary patterns and function

(Submitter supplied) Identifying the DNA-binding specificities of transcription factors (TF) is central to understanding gene networks that regulate growth and development. Such knowledge is lacking in oomycetes, a group of microbes that includes many important plant and animal pathogens. Here we describe the use of protein-binding oligonucleotide microarrays (PBMs) to define the DNA-binding preferences of 14 families of TFs from the oomycete Phytophthora infestans, which causes late blight of potato and tomato. more...

Organism:: synthetic construct; Phytophthora infestans

Type:: Other

Platform:: GPL11260
146 Samples

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Accession:: GSE270411

ID:: 200270411

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Select item 1000112602.

Agilent custom ME and HK design array [8mer]

(Submitter supplied) 8mer sequence depicted below is not the sequence represented on the array, but the targeted sequence. Please see the two array design files attached below for array probe sequences. Protocol: This protein binding microarray (PBM) involved binding GST-tagged proteins to custom-designed, double-stranded 44K Agilent microarrays in order to determine their sequence preferences. The method is described in Berger et al., Nature Biotechnology 2006.