txid1296646[Organism:noexp] - GEO DataSets - NCBI

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Items: 11

Select item 2002214061.

RNA-seq of Mycobacteriophage Island3 infection of Mycolicibacterium smegmatis mc2155, Mycolicibacterium smegmatis mc2155(Butters), and Mycolicibacterium smegmatis mc2155(Buttersgp57r)

(Submitter supplied) RNA-seq of Mycobacteriophage Island3 infection of Mycolicibacterium smegmatis mc2155, Mycolicibacterium smegmatis mc2155(Butters), and Mycolicibacterium smegmatis mc2155(Buttersgp57r) to assess the impact of Butters lysogen and specifically Buttersgp57r on transcript levels of island3 during infection.

Organism:: Mycobacterium phage Island3; Mycolicibacterium smegmatis MC2 155; Mycobacterium phage Butters

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL32963 GPL32962
18 Samples

Download data: CSV, TXT

Series

Accession:: GSE221406

ID:: 200221406

Select item 2000820042.

Transcriptomic profile of several temperate Cluster N actinobacteriophages during various stages of growth.

(Submitter supplied) The goal of this sequencing project was to measure transcription levels of several Cluster N actinobacteriophages during different stages of their lifecycle, including lysogeny, early infection (30 minutes), and late infection (2 hours 30 minutes), in order to study which genes contribute to superinfection exclusion.

Organism:: Mycolicibacterium smegmatis MC2 155; Mycobacterium phage Charlie; Mycobacterium phage MichelleMyBell; Mycobacterium phage Phrann; Mycobacterium phage Redi; Mycobacterium phage Xerxes; Mycobacterium phage Panchino; Mycobacterium phage Xeno; Mycobacterium phage Butters

Type:: Expression profiling by high throughput sequencing

8 related Platforms
12 Samples

Download data: BEDGRAPH

Series

Accession:: GSE82004

ID:: 200082004

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000329633.

Illumina HiSeq 4000 (Mycobacterium phage Butters; Mycobacterium phage Island3; Mycolicibacterium smegmatis MC2 155)

Organism:: Mycolicibacterium smegmatis MC2 155; Mycobacterium phage Island3; Mycobacterium phage Butters

1 Series
6 Samples

Platform

Accession:: GPL32963

ID:: 100032963

Select item 1000219534.

Illumina MiSeq (Mycobacterium phage Butters; Mycobacterium smegmatis str. MC2 155)

Organism:: Mycolicibacterium smegmatis MC2 155; Mycobacterium phage Butters

1 Series
1 Sample

Platform

Accession:: GPL21953

ID:: 100021953

Select item 3068655765.

Mycobacterium phage Island3, infection of Mycolicibacterium smegmatis mc155(Butters), 150 mins, bio rep3

Organism:: Mycobacterium phage Island3; Mycolicibacterium smegmatis MC2 155; Mycobacterium phage Butters

Source name:: Lehigh University

Platform:: GPL32963
Series:: GSE221406

Download data: TXT

Sample

Accession:: GSM6865576

ID:: 306865576

SRA Run Selector

Select item 3068655756.

Mycobacterium phage Island3, infection of Mycolicibacterium smegmatis mc155(Butters), 150 mins, bio rep2

Organism:: Mycobacterium phage Butters; Mycolicibacterium smegmatis MC2 155; Mycobacterium phage Island3

Source name:: Lehigh University

Platform:: GPL32963
Series:: GSE221406

Download data: TXT

Sample

Accession:: GSM6865575

ID:: 306865575

SRA Run Selector

Select item 3068655747.

Mycobacterium phage Island3, infection of Mycolicibacterium smegmatis mc155(Butters), 150 mins, bio rep1

Organism:: Mycobacterium phage Butters; Mycobacterium phage Island3; Mycolicibacterium smegmatis MC2 155

Source name:: Lehigh University

Platform:: GPL32963
Series:: GSE221406

Download data: TXT

Sample

Accession:: GSM6865574

ID:: 306865574

SRA Run Selector

Select item 3068655738.

Mycobacterium phage Island3, infection of Mycolicibacterium smegmatis mc155(Butters), 30 mins, bio rep3

Organism:: Mycobacterium phage Butters; Mycolicibacterium smegmatis MC2 155; Mycobacterium phage Island3

Source name:: Lehigh University

Platform:: GPL32963
Series:: GSE221406

Download data: TXT

Sample

Accession:: GSM6865573

ID:: 306865573

SRA Run Selector

Select item 3068655729.

Mycobacterium phage Island3, infection of Mycolicibacterium smegmatis mc155(Butters), 30 mins, bio rep2

Organism:: Mycobacterium phage Island3; Mycobacterium phage Butters; Mycolicibacterium smegmatis MC2 155

Source name:: Lehigh University

Platform:: GPL32963
Series:: GSE221406

Download data: TXT

Sample

Accession:: GSM6865572

ID:: 306865572

SRA Run Selector

Select item 30686557110.

Mycobacterium phage Island3, infection of Mycolicibacterium smegmatis mc155(Butters), 30 mins, bio rep1

Organism:: Mycobacterium phage Island3; Mycolicibacterium smegmatis MC2 155; Mycobacterium phage Butters

Source name:: Lehigh University

Platform:: GPL32963
Series:: GSE221406

Download data: TXT

Sample

Accession:: GSM6865571

ID:: 306865571

SRA Run Selector

Select item 30217983511.

Mycobacteriophage Butters lysogen

Organism:: Mycolicibacterium smegmatis MC2 155; Mycobacterium phage Butters

Source name:: Cells grown in liquid media

Platform:: GPL21953
Series:: GSE82004

Download data: BEDGRAPH

Sample

Accession:: GSM2179835

ID:: 302179835

SRA Run Selector

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