GEO DataSets

Analysis of leaves of rice cultivar Nipponbare 3 or 4 days following inoculation with the virulent Magnaporthe grisea FR13 isolate. M. grisea causes blast. Results provide insight into the molecular basis of the susceptibility of rice to blast.

Organism:

Oryza sativa

Type:

Expression profiling by array, transformed count, 2 infection, 2 time sets

Platform:

GPL2025

Series:

GSE7256

8 Samples

Download data: CEL

Analysis of 25 finely dissected stages/organs of the reproductive process encompassing anther development, pollination-fertilization, and embryogenensis. Vegetative tissues were used as controls. Results provide insight into molecular mechanisms underlying the reproductive process.

Organism:

Oryza sativa

Type:

Expression profiling by array, transformed count, 4 development stage, 33 other sets

Platform:

GPL2025

Series:

GSE14304

98 Samples

Download data: CEL

Analysis of rice leaves following RNAi knockdown of OsSRT1, a Silent Information Regulator 2 (SIR2)-related gene. Members of the SIR2 family are NAD(+)-dependent histone deacetylases. OsSRT1is one of the two SIR2-related genes found in rice. Results provide insight into the function of OsSRT1.

Organism:

Oryza sativa

Type:

Expression profiling by array, count, 2 protocol sets

Platform:

GPL2025

Series:

GSE7197

6 Samples

Download data: CEL, EXP, JPG

Analysis of transgenic rice leaves overexpressing OsRR6, a cytokinin (CK)-inducible type-A response regulator. Results provide insight into the role of OsRR6 in CK signaling and further the understanding of the function of CK in rice.

Organism:

Oryza sativa

Type:

Expression profiling by array, count, 2 protocol sets

Platform:

GPL2025

Series:

GSE6720

4 Samples

Download data: CEL

Analysis of rice roots and leaves 30 and 120 minutes after treatment with the cytokinin trans-zeatin (tZ). Cytokinins (CKs) are a class of plant hormones that regulate the growth and development of plants. Results provide insight into the molecular mechanisms regulated by CK in rice.

Organism:

Oryza sativa

Type:

Expression profiling by array, count, 2 agent, 2 time, 2 tissue sets

Platform:

GPL2025

Series:

GSE6719

24 Samples

Download data: CEL

Analysis of coleoptiles of rice grown under anaerobic conditions. Rice seeds are capable of germinating in the absence of oxygen. Under anoxia, rice coleoptiles reach lengths greater than that of aerobically grown rice. Results provide insight into the control of anaerobic carbohydrate metabolism.

Organism:

Oryza sativa

Type:

Expression profiling by array, count, 2 stress sets

Platform:

GPL2025

Series:

GSE6908

4 Samples

Download data: CEL

Expression profiling of 1-week-old roots from varieties Azucena and Bala following treatment with 1 ppm sodium arsenate. Results provide insight into the molecular basis of arsenate tolerance exhibited by the Bala variety.

Organism:

Oryza sativa

Type:

Expression profiling by array, count, 2 agent, 2 strain sets

Platform:

GPL2025

Series:

GSE4471

8 Samples

Download data: CEL