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Links from GEO DataSets

Items: 3

1.

Combinatorial gene regulation by modulation of relative pulse timing

(Submitter supplied) We performed RNAseq with Saccharomyces cerevisiae cells under both transient and steady-state conditions to study the regulation of genes by two pulsatile transcription factors, Msn2 and Mig1. The transient data allowed us to identify combinatorial targets while the steady-state data was used to study target expression dependence on the relative pulse timing between the two TFs.
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by high throughput sequencing
Platform:
GPL17342
28 Samples
Download data: TXT
Series
Accession:
GSE71712
ID:
200071712
2.

Signal-dependent dynamics of transcription factor translocation controls gene expression

(Submitter supplied) Time course transcription profiling of S. cerevisiae in response to different dynamics of protein kinase A inhibition
Organism:
Saccharomyces cerevisiae
Type:
Expression profiling by array
Platform:
GPL10786
56 Samples
Download data: GPR
Series
Accession:
GSE32703
ID:
200032703
3.

Yeast cell fate control by temporal redundancy modulation of transcription factor paralogs

(Submitter supplied) Recent single-cell studies have revealed that yeast stress response involves multiple transcription factors that are temporally activated in pulses. However, it remains largely unclear whether and how these dynamic transcription factors temporally interact to regulate stress survival. Here we show that budding yeast cells can exploit the temporal relationship between paralogous general stress regulators, Msn2 and Msn4, during stress response. more...
Organism:
Nakaseomyces glabratus; Saccharomyces cerevisiae
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL29410 GPL26171
36 Samples
Download data: CSV
Series
Accession:
GSE161373
ID:
200161373
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