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Links from GEO DataSets

Items: 3

1.

The RHW1-ZCN4 regulatory pathway confers natural variation of husk leaf width in maize

(Submitter supplied) Maize husk leaf - the outer leafy layers covering the ear - modulates kernel yield and quality. Despite its importance, however, the genetic controls underlying husk leaf development remain elusive. Our previous genome-wide association study identified a single nucleotide polymorphism located in the gene RHW1 (Regulator of Husk leaf Width) that is significantly associated with husk leaf-width diversity in maize. more...
Organism:
Zea mays
Type:
Expression profiling by high throughput sequencing
Platform:
GPL25410
6 Samples
Download data: TXT
Series
Accession:
GSE217926
ID:
200217926
2.

Natural polymorphisms in ZMET2 encoding a DNA methyltransferase modulate the number of husk layers in maize

(Submitter supplied) The goals of this study are to investigate the effect of ZMET2 on genome-wide DNA methylation and gene expression.
Organism:
Zea mays
Type:
Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platform:
GPL25410
22 Samples
Download data: BW, TAB, TXT
Series
Accession:
GSE232004
ID:
200232004
3.

eQTL analysis of 5 DAP maize kernel

(Submitter supplied) Kernel development is accompanied by complex gene networks. Expression quantitative trait loci (eQTL) analysis is an efficient way to detect the regulatory elements of genes, especially the trans-eQTLs help to construct the regulatory networks of genes and contribute to a better understanding of the intrinsic mechanisms of biological processes. Till now, the 15 DAP (day after pollination) eQTL has been elucidated in maize kernel, but little is known about the early stage. more...
Organism:
Zea mays
Type:
Expression profiling by high throughput sequencing
Platform:
GPL17628
318 Samples
Download data: TXT
Series
Accession:
GSE110315
ID:
200110315
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