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Tmem181c-ps transmembrane protein 181C, pseudogene [ Mus musculus (house mouse) ]

Gene ID: 100040525, updated on 17-Aug-2024

Summary

Official Symbol
Tmem181c-psprovided by MGI
Official Full Name
transmembrane protein 181C, pseudogeneprovided by MGI
Primary source
MGI:MGI:3780993
See related
AllianceGenome:MGI:3780993
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
100040596; Tmem181d-ps
Expression
Broad expression in frontal lobe adult (RPKM 33.7), cortex adult (RPKM 31.9) and 22 other tissues See more
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Genomic context

See Tmem181c-ps in Genome Data Viewer
Location:
17 A1; 17 4.14 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (6877502..6888324, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (6610103..6620925, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 53224 Neighboring gene STARR-positive B cell enhancer mm9_chr17:6657759-6658060 Neighboring gene STARR-positive B cell enhancers mm9_chr17:6806288-6806589 and mm9_chr17:6654863-6655163 Neighboring gene dynein light chain Tctex-type 1C Neighboring gene STARR-positive B cell enhancers mm9_chr17:6600655-6600955 and mm9_chr17:6860503-6860804 Neighboring gene dynein light chain Tctex-type 1F Neighboring gene synaptotagmin-like 3 Neighboring gene predicted gene, 36309

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028305.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC167249, AK045744

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    6877502..6888324 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)