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ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif 4 [ Apteryx mantelli mantelli ]

Gene ID: 106500493, updated on 13-Mar-2024

Summary

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Gene symbol
ADAMTS4
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Apteryx mantelli mantelli (sub-species: mantelli)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx; Apteryx mantelli
Orthologs
human mouse all
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Genomic context

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See ADAMTS4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current AptMant0 (GCF_001039765.1) Unplaced Scaffold NW_013989083.1 (22009..30694)

NW_013989083.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase core subunit S2 Neighboring gene beta-1,4-galactosyltransferase 3 Neighboring gene protoporphyrinogen oxidase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_013989083.1 Unplaced Scaffold Reference AptMant0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Apteryx australis mantelli Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference AptMant0

Genomic

  1. NW_013989083.1 Reference AptMant0

    Range
    22009..30694
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013962252.1 → XP_013817706.1  A disintegrin and metalloproteinase with thrombospondin motifs 4

    UniProtKB/TrEMBL
    A0A8B7K389
    Conserved Domains (4) summary
    smart00209
    Location:335 → 382
    TSP1; Thrombospondin type 1 repeats
    cd04273
    Location:77 → 238
    ZnMc_ADAMTS_like; Zinc-dependent metalloprotease, ADAMTS_like subgroup. ADAMs (A Disintegrin And Metalloprotease) are glycoproteins, which play roles in cell signaling, cell fusion, and cell-cell interactions. This particular subfamily represents domain architectures that ...
    pfam05986
    Location:16 → 73
    ADAM_spacer1; ADAM-TS Spacer 1
    cl15456
    Location:251 → 322
    ADAM_CR; ADAM cysteine-rich
Nucleotide Protein
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