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LOC108179246 coiled-coil domain-containing protein 106-like [ Danio rerio (zebrafish) ]

Gene ID: 108179246, updated on 4-Nov-2022

Summary

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Gene symbol
LOC108179246
Gene description
coiled-coil domain-containing protein 106-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
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Genomic context

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See LOC108179246 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
2
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 15 NC_007126.7 (10861227..10862073, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 15 NC_007126.6 (10938783..10940685, complement)

Chromosome 15 - NC_007126.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101883612 Neighboring gene uncharacterized LOC108179115 Neighboring gene family with sequence similarity 181 member B Neighboring gene general transcription factor II-I repeat domain-containing protein 2B-like Neighboring gene prolylcarboxypeptidase (angiotensinase C)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 106-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007126.7 Reference GRCz11 Primary Assembly

    Range
    10861227..10862073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021466544.1 → XP_021322219.1  coiled-coil domain-containing protein 106-like

    UniProtKB/TrEMBL
    A0A8M9PCP9
    Conserved Domains (1) summary
    pfam15794
    Location:77 → 176
    CCDC106; Coiled-coil domain-containing protein 106

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394934.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    305365..306211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021472902.1 → XP_021328577.1  coiled-coil domain-containing protein 106-like

    UniProtKB/TrEMBL
    A0A8M9PCP9
    Conserved Domains (1) summary
    pfam15794
    Location:77 → 176
    CCDC106; Coiled-coil domain-containing protein 106

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395320.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    102975..104315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_002457914.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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