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AVT25_gp42 transcriptional regulator [ Bacillus phage Pavlov ]

Gene ID: 26624358, updated on 8-Jan-2023

Summary

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Gene symbol
AVT25_gp42
Gene description
transcriptional regulator
Locus tag
AVT25_gp42
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus phage Pavlov (nat-host: Bacillus megaterium)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Pagevirus
Old locus tag
CPT_Pavlov42
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Genomic context

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Sequence:
NC_028782.1 (36163..36627)

NC_028782.1Genomic Context describing neighboring genes Neighboring gene DnaC-like helicase loader Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene RNA polymerase sigma factor Neighboring gene hypothetical protein Neighboring gene HNH endonuclease Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028782.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Complete Genome Sequence of Bacillus megaterium Podophage Pavlov. Burgos RW, et al. Genome Announc, 2015 Sep 3. PMID 26337888, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

regulatory

  • Loc: 36163-36166 regulatory_class = ribosome_binding_site
  • Loc: 36615-36620 regulatory_class = ribosome_binding_site

General protein information

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Preferred Names
transcriptional regulator
YP_009197511.1
  • contains Cro/C1-type helix-turn-helix domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_028782.1 Reference assembly

    Range
    36163..36627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009197511.1 transcriptional regulator [Bacillus phage Pavlov]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0H4TGQ9
    Conserved Domains (1) summary
    pfam12824
    Location:102 → 141
    MRP-L20; Mitochondrial ribosomal protein subunit L20
Nucleotide Protein
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