U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

alt aluminum tubes [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42127, updated on 18-Sep-2024

Summary

Go to the top of the page Help
Official Symbol
altprovided by FlyBase
Official Full Name
aluminum tubesprovided by FlyBase
Primary source
FLYBASE:FBgn0038535
Locus tag
Dmel_CG18212
See related
AllianceGenome:FB:FBgn0038535
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG18212; Dmel\CG18212; Q9VEH0_DROME
Summary
Located in endomembrane system. Is expressed in adult head; adult heart; and organism. Orthologous to human RRBP1 (ribosome binding protein 1). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See alt in Genome Data Viewer
Location:
90C1-90C1; 3-61 cM
Exon count:
11
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (17673732..17682515, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (13499454..13508237, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene transfer RNA:Alanine-AGC 2-10 Neighboring gene uncharacterized protein Neighboring gene Monopolar spindle 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The multiple roles of mps1 in Drosophila female meiosis. Gilliland WD, et al. PLoS Genet, 2007 Jul. PMID 17630834, Free PMC Article
  2. A germline clone screen for meiotic mutants in Drosophila melanogaster. Page SL, et al. Fly (Austin), 2007 May-Jun. PMID 18820465
  3. The meiotic defects of mutants in the Drosophila mps1 gene reveal a critical role of Mps1 in the segregation of achiasmate homologs. Gilliland WD, et al. Curr Biol, 2005 Apr 12. PMID 15823541
  4. Sometimes the result is not the answer: the truths and the lies that come from using the complementation test. Hawley RS, et al. Genetics, 2006 Sep. PMID 16988106, Free PMC Article
  5. The mitotic arrest in response to hypoxia and of polar bodies during early embryogenesis requires Drosophila Mps1. Fischer MG, et al. Curr Biol, 2004 Nov 23. PMID 15556864

See all (51) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
located_in endomembrane system HDA PubMed 
is_active_in endoplasmic reticulum membrane IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
aluminum tubes
Names
CG18212-PA
CG18212-PB
CG18212-PD
CG18212-PE
CG18212-PF
CG18212-PG
CG18212-PH
CG18212-PI
alt-PA
alt-PB
alt-PD
alt-PE
alt-PF
alt-PG
alt-PH
alt-PI

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    17673732..17682515 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001275750.1 → NP_001262679.1  aluminum tubes, isoform I [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262679.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960Y8
    Conserved Domains (1) summary
    TIGR02168
    Location:398 → 694
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  2. NM_001275749.1 → NP_001262678.1  aluminum tubes, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262678.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VEH0
    Conserved Domains (1) summary
    pfam00038
    Location:384 → 656
    Filament; Intermediate filament protein

  3. NM_206505.2 → NP_996227.1  aluminum tubes, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_996227.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VEH0
    Conserved Domains (1) summary
    pfam00038
    Location:384 → 656
    Filament; Intermediate filament protein

  4. NM_169771.2 → NP_732259.1  aluminum tubes, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732259.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VEH0
    Related
    FBpp0088431
    Conserved Domains (1) summary
    pfam00038
    Location:384 → 656
    Filament; Intermediate filament protein

  5. NM_169770.3 → NP_732258.1  aluminum tubes, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732258.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VEH0
    Related
    FBpp0088432
    Conserved Domains (1) summary
    pfam00038
    Location:384 → 656
    Filament; Intermediate filament protein

  6. NM_142388.3 → NP_650645.1  aluminum tubes, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650645.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q960Y8
    Related
    FBpp0088433
    Conserved Domains (1) summary
    TIGR02168
    Location:398 → 694
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  7. NM_169768.2 → NP_732256.1  aluminum tubes, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732256.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VEH0
    Related
    FBpp0088434
    Conserved Domains (1) summary
    pfam00038
    Location:384 → 656
    Filament; Intermediate filament protein

  8. NM_169769.2 → NP_732257.1  aluminum tubes, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732257.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VEH0
    Related
    FBpp0088435
    Conserved Domains (1) summary
    pfam00038
    Location:384 → 656
    Filament; Intermediate filament protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q95R41 Q95R41
Q960Y8 Q960Y8
Q9VEH0 Q9VEH0

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials
Tools