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LOC4326740 late embryogenesis abundant protein Lea14-A [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4326740, updated on 12-Jul-2024

Summary

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Gene symbol
LOC4326740
Gene description
late embryogenesis abundant protein Lea14-A
Locus tag
OSNPB_010225600
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0443E07.9
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Genomic context

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See LOC4326740 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (6932634..6934192, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (6922131..6922766, complement)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like Neighboring gene 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial Neighboring gene uncharacterized LOC136354937 Neighboring gene probable membrane-associated kinase regulator 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in response to desiccation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
late embryogenesis abundant protein Lea14-A
Names
Os01g0225600
P0492F05.18
putative late embryogenesis-abundant protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    6932634..6934192 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015769594.3 → XP_015625080.1  late embryogenesis abundant protein Lea14-A

    UniProtKB/TrEMBL
    A0A5S6RA95, A2ZQV7, Q0JPF3, Q7F794, Q9AWZ5
    Conserved Domains (1) summary
    pfam03168
    Location:44 → 140
    LEA_2; Late embryogenesis abundant protein
Nucleotide Protein
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