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PLEC plectin [ Homo sapiens (human) ]

Gene ID: 5339, updated on 14-Nov-2024

Summary

Official Symbol
PLECprovided by HGNC
Official Full Name
plectinprovided by HGNC
Primary source
HGNC:HGNC:9069
See related
Ensembl:ENSG00000178209 MIM:601282; AllianceGenome:HGNC:9069
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HD1; PCN; EBS1; EBSO; PLTN; EBS5A; EBS5B; EBS5C; EBS5D; EBSMD; EBSND; EBSOG; EBSPA; PLEC1; LGMD2Q; PLEC1b; LGMDR17
Summary
Plectin is a prominent member of an important family of structurally and in part functionally related proteins, termed plakins or cytolinkers, that are capable of interlinking different elements of the cytoskeleton. Plakins, with their multi-domain structure and enormous size, not only play crucial roles in maintaining cell and tissue integrity and orchestrating dynamic changes in cytoarchitecture and cell shape, but also serve as scaffolding platforms for the assembly, positioning, and regulation of signaling complexes (reviewed in PMID: 9701547, 11854008, and 17499243). Plectin is expressed as several protein isoforms in a wide range of cell types and tissues from a single gene located on chromosome 8 in humans (PMID: 8633055, 8698233). Until 2010, this locus was named plectin 1 (symbol PLEC1 in human; Plec1 in mouse and rat) and the gene product had been referred to as "hemidesmosomal protein 1" or "plectin 1, intermediate filament binding 500kDa". These names were superseded by plectin. The plectin gene locus in mouse on chromosome 15 has been analyzed in detail (PMID: 10556294, 14559777), revealing a genomic exon-intron organization with well over 40 exons spanning over 62 kb and an unusual 5' transcript complexity of plectin isoforms. Eleven exons (1-1j) have been identified that alternatively splice directly into a common exon 2 which is the first exon to encode plectin's highly conserved actin binding domain (ABD). Three additional exons (-1, 0a, and 0) splice into an alternative first coding exon (1c), and two additional exons (2alpha and 3alpha) are optionally spliced within the exons encoding the acting binding domain (exons 2-8). Analysis of the human locus has identified eight of the eleven alternative 5' exons found in mouse and rat (PMID: 14672974); exons 1i, 1j and 1h have not been confirmed in human. Furthermore, isoforms lacking the central rod domain encoded by exon 31 have been detected in mouse (PMID:10556294), rat (PMID: 9177781), and human (PMID: 11441066, 10780662, 20052759). The short alternative amino-terminal sequences encoded by the different first exons direct the targeting of the various isoforms to distinct subcellular locations (PMID: 14559777). As the expression of specific plectin isoforms was found to be dependent on cell type (tissue) and stage of development (PMID: 10556294, 12542521, 17389230) it appears that each cell type (tissue) contains a unique set (proportion and composition) of plectin isoforms, as if custom-made for specific requirements of the particular cells. Concordantly, individual isoforms were found to carry out distinct and specific functions (PMID: 14559777, 12542521, 18541706). In 1996, a number of groups reported that patients suffering from epidermolysis bullosa simplex with muscular dystrophy (EBS-MD) lacked plectin expression in skin and muscle tissues due to defects in the plectin gene (PMID: 8698233, 8941634, 8636409, 8894687, 8696340). Two other subtypes of plectin-related EBS have been described: EBS-pyloric atresia (PA) and EBS-Ogna. For reviews of plectin-related diseases see PMID: 15810881, 19945614. Mutations in the plectin gene related to human diseases should be named based on the position in NM_000445 (variant 1, isoform 1c), unless the mutation is located within one of the other alternative first exons, in which case the position in the respective Reference Sequence should be used. [provided by RefSeq, Aug 2011]
Expression
Ubiquitous expression in skin (RPKM 18.0), colon (RPKM 16.2) and 25 other tissues See more
Orthologs
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Genomic context

See PLEC in Genome Data Viewer
Location:
8q24.3
Exon count:
43
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (143915153..143976745, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (145073432..145135033, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (144989321..145050913, complement)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:144923032-144923762 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:144923763-144924492 Neighboring gene nuclear receptor binding protein 2 Neighboring gene microRNA 6845 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:144939917-144940418 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:144940419-144940918 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:144948081-144948772 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:144949483-144950125 Neighboring gene epiplakin 1 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19626 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:144953345-144953987 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:144959005-144959528 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:144959529-144960052 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:144964657-144965548 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:144965549-144966440 Neighboring gene Sharpr-MPRA regulatory region 5026 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:144977006-144977576 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:144990280-144990475 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:144999476-145000347 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28076 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28075 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:145002644-145002773 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:145006382-145007317 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19628 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19629 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28077 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19630 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28078 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19631 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28079 Neighboring gene Sharpr-MPRA regulatory region 8265 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19632 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19633 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28080 Neighboring gene uncharacterized LOC124902040 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19634 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:145020877-145021664 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:145021665-145022452 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:145024027-145024814 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19635 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28081 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19636 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19637 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19638 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19639 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:145031501-145032404 Neighboring gene microRNA 661 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:145038963-145039740 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:145039741-145040518 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:145040519-145041295 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:145046021-145046870 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:145046871-145047718 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19641 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19642 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19643 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:145050844-145051005 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:145051354-145051848 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19646 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28082 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28083 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:145060401-145061304 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19647 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19648 Neighboring gene Sharpr-MPRA regulatory region 3935 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:145065969-145066470 Neighboring gene poly(ADP-ribose) polymerase family member 10 Neighboring gene glutamate ionotropic receptor NMDA type subunit associated protein 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28085 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19651 Neighboring gene spermatogenesis and centriole associated 1 Neighboring gene NANOG hESC enhancer GRCh37_chr8:145092262-145092784

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

Associated conditions

Description Tests
Autosomal recessive limb-girdle muscular dystrophy type 2Q
MedGen: C3150989 OMIM: 613723 GeneReviews: Not available
Compare labs
Epidermolysis bullosa simplex 5B, with muscular dystrophy
MedGen: C2931072 OMIM: 226670 GeneReviews: Epidermolysis Bullosa Simplex
Compare labs
Epidermolysis bullosa simplex 5C, with pyloric atresia Compare labs
Epidermolysis bullosa simplex with nail dystrophy
MedGen: C4225309 OMIM: 616487 GeneReviews: Not available
Compare labs
Epidermolysis bullosa simplex, Ogna type Compare labs
Junctional epidermolysis bullosa with pyloric atresia Compare labs

EBI GWAS Catalog

Description
Biological, clinical and population relevance of 95 loci for blood lipids.
EBI GWAS Catalog
Discovery and refinement of loci associated with lipid levels.
EBI GWAS Catalog
Multiethnic meta-analysis of genome-wide association studies in >100 000 subjects identifies 23 fibrinogen-associated Loci but no strong evidence of a causal association between circulating fibrinogen and cardiovascular disease.
EBI GWAS Catalog
New gene functions in megakaryopoiesis and platelet formation.
EBI GWAS Catalog

HIV-1 interactions

Protein interactions

Protein Gene Interaction Pubs
Vif vif Variants of HIV-1 Vif have been shown to form perinuclear aggregates and relocalize plectin to these structures PubMed
Vpr vpr A stable-isotope labeling by amino acids in cell culture coupled with mass spectrometry-based proteomics identifies upregulation of plectin (PLEC) expression by HIV-1 Vpr in Vpr transduced macrophages PubMed

Go to the HIV-1, Human Interaction Database

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables RNA binding HDA PubMed 
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 
enables ankyrin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables ankyrin binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables cadherin binding HDA PubMed 
enables dystroglycan binding IEA
Inferred from Electronic Annotation
more info
 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables structural constituent of cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 
enables structural constituent of muscle IMP
Inferred from Mutant Phenotype
more info
PubMed 
enables structural constituent of muscle TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
involved_in T cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 
involved_in actomyosin contractile ring assembly actin filament organization IEA
Inferred from Electronic Annotation
more info
 
involved_in adherens junction organization IEA
Inferred from Electronic Annotation
more info
 
involved_in cardiac muscle cell development IEA
Inferred from Electronic Annotation
more info
 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to fluid shear stress IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to hydrostatic pressure IEA
Inferred from Electronic Annotation
more info
 
involved_in cellular response to mechanical stimulus IEA
Inferred from Electronic Annotation
more info
 
involved_in establishment of skin barrier IEA
Inferred from Electronic Annotation
more info
 
involved_in fibroblast migration IEA
Inferred from Electronic Annotation
more info
 
involved_in gene expression IEA
Inferred from Electronic Annotation
more info
 
involved_in hemidesmosome assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in hemidesmosome assembly IDA
Inferred from Direct Assay
more info
PubMed 
involved_in intermediate filament cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intermediate filament organization IEA
Inferred from Electronic Annotation
more info
 
involved_in keratinocyte development IEA
Inferred from Electronic Annotation
more info
 
involved_in leukocyte migration involved in immune response IEA
Inferred from Electronic Annotation
more info
 
involved_in mitochondrion organization IEA
Inferred from Electronic Annotation
more info
 
involved_in multicellular organism growth IEA
Inferred from Electronic Annotation
more info
 
involved_in myoblast differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in nucleus organization IEA
Inferred from Electronic Annotation
more info
 
involved_in peripheral nervous system myelin maintenance IEA
Inferred from Electronic Annotation
more info
 
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
 
involved_in protein-containing complex organization IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of vascular permeability IEA
Inferred from Electronic Annotation
more info
 
involved_in respiratory electron transport chain IEA
Inferred from Electronic Annotation
more info
 
involved_in response to food IEA
Inferred from Electronic Annotation
more info
 
involved_in sarcomere organization IEA
Inferred from Electronic Annotation
more info
 
involved_in skeletal muscle fiber development IEA
Inferred from Electronic Annotation
more info
 
involved_in skeletal myofibril assembly IEA
Inferred from Electronic Annotation
more info
 
involved_in tight junction organization IEA
Inferred from Electronic Annotation
more info
 
involved_in transmission of nerve impulse IEA
Inferred from Electronic Annotation
more info
 
involved_in wound healing IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 
located_in axon IEA
Inferred from Electronic Annotation
more info
 
located_in brush border IEA
Inferred from Electronic Annotation
more info
 
located_in costamere TAS
Traceable Author Statement
more info
PubMed 
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytosol IDA
Inferred from Direct Assay
more info
 
located_in cytosol TAS
Traceable Author Statement
more info
 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 
located_in extracellular exosome HDA PubMed 
located_in focal adhesion HDA PubMed 
is_active_in focal adhesion IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in focal adhesion IDA
Inferred from Direct Assay
more info
 
is_active_in hemidesmosome IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in hemidesmosome IDA
Inferred from Direct Assay
more info
PubMed 
colocalizes_with intermediate filament IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in intermediate filament cytoskeleton IDA
Inferred from Direct Assay
more info
 
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 
located_in myelin sheath IEA
Inferred from Electronic Annotation
more info
 
is_active_in perinuclear region of cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane NAS
Non-traceable Author Statement
more info
PubMed 
located_in podosome ISS
Inferred from Sequence or Structural Similarity
more info
 
is_active_in sarcolemma IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in sarcolemma IDA
Inferred from Direct Assay
more info
PubMed 
located_in sarcoplasm ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
plectin
Names
hemidesmosomal protein 1
plectin 1, intermediate filament binding protein 500kDa

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_012492.1 RefSeqGene

    Range
    5001..66593
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_000445.5NP_000436.2  plectin isoform 1c

    See identical proteins and their annotated locations for NP_000436.2

    Status: REVIEWED

    Description
    Transcript Variant: This variant (1) contains the 5'-most coding exon (exon 1c) and encodes isoform 1c.
    Source sequence(s)
    AY480044, BP312608
    Consensus CDS
    CCDS43769.1
    UniProtKB/TrEMBL
    E9PMV1
    Related
    ENSP00000388180.2, ENST00000436759.6
    Conserved Domains (10) summary
    smart00250
    Location:31213157
    PLEC; Plectin repeat
    cd00014
    Location:70172
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:645834
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:187285
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40684109
    Plectin; Plectin repeat
    pfam01576
    Location:13702493
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14701481
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17531955
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13791506
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:15051625
    ATP-synt_B; ATP synthase B/B' CF(0)
  2. NM_001410941.1NP_001397870.1  plectin isoform 2

    Status: REVIEWED

    Source sequence(s)
    AC109322
    Consensus CDS
    CCDS94359.1
    UniProtKB/TrEMBL
    H0YDN1
    Related
    ENSP00000433982.2, ENST00000527303.2
  3. NM_201378.4NP_958780.1  plectin isoform 1f

    See identical proteins and their annotated locations for NP_958780.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1f) contains a distinct N-terminus compared to isoform 1c. Plectin isoform 1f has been found to be concentrated in vinculin-positive structures at actin stress fiber ends (PMID: 14559777).
    Source sequence(s)
    AY480045, BP315878
    Consensus CDS
    CCDS43770.1
    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Related
    ENSP00000348702.3, ENST00000356346.7
    Conserved Domains (10) summary
    smart00250
    Location:30803116
    PLEC; Plectin repeat
    cd00014
    Location:29131
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:604793
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:146244
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40274068
    Plectin; Plectin repeat
    pfam01576
    Location:13292452
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14291440
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17121914
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13381465
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14641584
    ATP-synt_B; ATP synthase B/B' CF(0)
  4. NM_201379.3NP_958781.1  plectin isoform 1e

    See identical proteins and their annotated locations for NP_958781.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1e) contains a distinct N-terminus compared to isoform 1c.
    Source sequence(s)
    AY480046
    Consensus CDS
    CCDS43771.1
    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Related
    ENSP00000347044.2, ENST00000354958.6
    Conserved Domains (10) summary
    smart00250
    Location:30723108
    PLEC; Plectin repeat
    cd00014
    Location:21123
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:596785
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:138236
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40194060
    Plectin; Plectin repeat
    pfam01576
    Location:13212444
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14211432
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17041906
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13301457
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14561576
    ATP-synt_B; ATP synthase B/B' CF(0)
  5. NM_201380.4NP_958782.1  plectin isoform 1

    See identical proteins and their annotated locations for NP_958782.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (6) differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1) contains a distinct N-terminus compared to isoform 1c.
    Source sequence(s)
    AC109322, AY480047
    Consensus CDS
    CCDS43772.1
    UniProtKB/Swiss-Prot
    Q15148, Q15149, Q16640, Q6S376, Q6S377, Q6S378, Q6S379, Q6S380, Q6S381, Q6S382, Q6S383
    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Related
    ENSP00000323856.4, ENST00000322810.8
    Conserved Domains (11) summary
    smart00250
    Location:32313267
    PLEC; Plectin repeat
    cd00014
    Location:180282
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:755944
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:297395
    CH; Calponin homology (CH) domain
    pfam00681
    Location:41784219
    Plectin; Plectin repeat
    pfam01576
    Location:14802603
    Myosin_tail_1; Myosin tail
    pfam03501
    Location:7101
    S10_plectin; Plectin/S10 domain
    cd16269
    Location:15801591
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:18632065
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:14891616
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:16151735
    ATP-synt_B; ATP synthase B/B' CF(0)
  6. NM_201381.3NP_958783.1  plectin isoform 1d

    See identical proteins and their annotated locations for NP_958783.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (7) differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1d) contains a distinct N-terminus compared to isoform 1c. Plectin isoform 1d has been found associated with Z-disks in skeletal muscle (PMID: 17389230).
    Source sequence(s)
    AC109322, AY480048
    Consensus CDS
    CCDS47936.1
    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Related
    ENSP00000381756.2, ENST00000398774.6
    Conserved Domains (10) summary
    smart00250
    Location:30623098
    PLEC; Plectin repeat
    cd00014
    Location:11113
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:586775
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:128226
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40094050
    Plectin; Plectin repeat
    pfam01576
    Location:13112434
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14111422
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:16941896
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13201447
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14461566
    ATP-synt_B; ATP synthase B/B' CF(0)
  7. NM_201382.4NP_958784.1  plectin isoform 1b

    See identical proteins and their annotated locations for NP_958784.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (8) differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1b) contains a distinct N-terminus compared to isoform 1c. Plectin isoform 1b has been found to associate exclusively with mitochondria (PMID: 18541706, 14559777).
    Source sequence(s)
    AC109322, AY480049, BP231761
    Consensus CDS
    CCDS43773.1
    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Related
    ENSP00000346602.3, ENST00000354589.7
    Conserved Domains (10) summary
    smart00250
    Location:30943130
    PLEC; Plectin repeat
    cd00014
    Location:43145
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:618807
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:160258
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40414082
    Plectin; Plectin repeat
    pfam01576
    Location:13432466
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14431454
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17261928
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13521479
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14781598
    ATP-synt_B; ATP synthase B/B' CF(0)
  8. NM_201383.3NP_958785.1  plectin isoform 1g

    See identical proteins and their annotated locations for NP_958785.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (10) differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1g) contains a distinct N-terminus compared to isoform 1c.
    Source sequence(s)
    AC109322, AY480050
    Consensus CDS
    CCDS43774.1
    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Related
    ENSP00000350277.2, ENST00000357649.6
    Conserved Domains (10) summary
    smart00250
    Location:30983134
    PLEC; Plectin repeat
    cd00014
    Location:47149
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:622811
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:164262
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40454086
    Plectin; Plectin repeat
    pfam01576
    Location:13472470
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14471458
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17301932
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13561483
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14821602
    ATP-synt_B; ATP synthase B/B' CF(0)
  9. NM_201384.3NP_958786.1  plectin isoform 1a

    See identical proteins and their annotated locations for NP_958786.1

    Status: REVIEWED

    Description
    Transcript Variant: This variant (11) differs in the 5' UTR and the 5' coding region compared to variant 1. The resulting protein (isoform 1a) contains a distinct N-terminus compared to isoform 1c. Plectin isoform 1a has been found to associate specifically with hemidesmosome-like structures in keratinocytes (PMID: 12542521).
    Source sequence(s)
    AC109322, AY480051
    Consensus CDS
    CCDS43775.1
    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Related
    ENSP00000344848.3, ENST00000345136.8
    Conserved Domains (10) summary
    smart00250
    Location:30943130
    PLEC; Plectin repeat
    cd00014
    Location:43145
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:618807
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:160258
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40414082
    Plectin; Plectin repeat
    pfam01576
    Location:13432466
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14431454
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17261928
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13521479
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14781598
    ATP-synt_B; ATP synthase B/B' CF(0)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    143915153..143976745 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047421872.1XP_047277828.1  plectin isoform X7

    Related
    ENSP00000434583.1, ENST00000527096.5
  2. XM_006716588.4XP_006716651.1  plectin isoform X6

    UniProtKB/TrEMBL
    E9PMV1
    Related
    ENSP00000437303.2, ENST00000528025.6
    Conserved Domains (10) summary
    smart00250
    Location:31263162
    PLEC; Plectin repeat
    cd00014
    Location:70177
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:650839
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:192290
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40734114
    Plectin; Plectin repeat
    pfam01576
    Location:13752498
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14751486
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17581960
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13841511
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:15101630
    ATP-synt_B; ATP synthase B/B' CF(0)
  3. XM_047421890.1XP_047277846.1  plectin isoform X32

  4. XM_047421875.1XP_047277831.1  plectin isoform X14

  5. XM_047421889.1XP_047277845.1  plectin isoform X31

  6. XM_005250981.4XP_005251038.1  plectin isoform X12

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (10) summary
    smart00250
    Location:30853121
    PLEC; Plectin repeat
    cd00014
    Location:29136
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:609798
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:151249
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40324073
    Plectin; Plectin repeat
    pfam01576
    Location:13342457
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14341445
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17171919
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13431470
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14691589
    ATP-synt_B; ATP synthase B/B' CF(0)
  7. XM_047421893.1XP_047277849.1  plectin isoform X35

  8. XM_047421877.1XP_047277833.1  plectin isoform X19

  9. XM_047421891.1XP_047277847.1  plectin isoform X33

  10. XM_005250982.5XP_005251039.1  plectin isoform X13

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (10) summary
    smart00250
    Location:30773113
    PLEC; Plectin repeat
    cd00014
    Location:21128
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:601790
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:143241
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40244065
    Plectin; Plectin repeat
    pfam01576
    Location:13262449
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14261437
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17091911
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13351462
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14611581
    ATP-synt_B; ATP synthase B/B' CF(0)
  11. XM_047421884.1XP_047277840.1  plectin isoform X27

  12. XM_047421870.1XP_047277826.1  plectin isoform X5

  13. XM_047421882.1XP_047277838.1  plectin isoform X26

  14. XM_005250976.5XP_005251033.1  plectin isoform X4

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (11) summary
    smart00250
    Location:32363272
    PLEC; Plectin repeat
    cd00014
    Location:180287
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:760949
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:302400
    CH; Calponin homology (CH) domain
    pfam00681
    Location:41834224
    Plectin; Plectin repeat
    pfam01576
    Location:14852608
    Myosin_tail_1; Myosin tail
    pfam03501
    Location:7101
    S10_plectin; Plectin/S10 domain
    cd16269
    Location:15851596
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:18682070
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:14941621
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:16201740
    ATP-synt_B; ATP synthase B/B' CF(0)
  15. XM_047421895.1XP_047277851.1  plectin isoform X36

  16. XM_047421878.1XP_047277834.1  plectin isoform X20

  17. XM_047421892.1XP_047277848.1  plectin isoform X34

  18. XM_005250983.3XP_005251040.1  plectin isoform X18

    UniProtKB/TrEMBL
    A0A8I5KUE3, A0A8I5KYZ1
    Related
    ENSP00000510329.1, ENST00000693060.1
    Conserved Domains (10) summary
    smart00250
    Location:30713107
    PLEC; Plectin repeat
    cd00014
    Location:20122
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:595784
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:137235
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40184059
    Plectin; Plectin repeat
    pfam01576
    Location:13202443
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14201431
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17031905
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13291456
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14551575
    ATP-synt_B; ATP synthase B/B' CF(0)
  19. XM_006716589.3XP_006716652.1  plectin isoform X15

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (10) summary
    smart00250
    Location:30763112
    PLEC; Plectin repeat
    cd00014
    Location:20127
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:600789
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:142240
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40234064
    Plectin; Plectin repeat
    pfam01576
    Location:13252448
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14251436
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17081910
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13341461
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14601580
    ATP-synt_B; ATP synthase B/B' CF(0)
  20. XM_005250984.6XP_005251041.1  plectin isoform X21

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (10) summary
    smart00250
    Location:30673103
    PLEC; Plectin repeat
    cd00014
    Location:11118
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:591780
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:133231
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40144055
    Plectin; Plectin repeat
    pfam01576
    Location:13162439
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14161427
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:16991901
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13251452
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14511571
    ATP-synt_B; ATP synthase B/B' CF(0)
  21. XM_047421888.1XP_047277844.1  plectin isoform X30

  22. XM_047421874.1XP_047277830.1  plectin isoform X11

  23. XM_005250979.5XP_005251036.1  plectin isoform X8

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (10) summary
    smart00250
    Location:30993135
    PLEC; Plectin repeat
    cd00014
    Location:43150
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:623812
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:165263
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40464087
    Plectin; Plectin repeat
    pfam01576
    Location:13482471
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14481459
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17311933
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13571484
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14831603
    ATP-synt_B; ATP synthase B/B' CF(0)
  24. XM_047421881.1XP_047277837.1  plectin isoform X25

  25. XM_047421869.1XP_047277825.1  plectin isoform X3

  26. XM_047421880.1XP_047277836.1  plectin isoform X24

  27. XM_011517130.3XP_011515432.1  plectin isoform X2

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (10) summary
    smart00250
    Location:30993135
    PLEC; Plectin repeat
    cd00014
    Location:47154
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:623812
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:169267
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40464087
    Plectin; Plectin repeat
    pfam01576
    Location:13482471
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14481459
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17311933
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13571484
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14831603
    ATP-synt_B; ATP synthase B/B' CF(0)
  28. XM_011517132.3XP_011515434.1  plectin isoform X23

    Conserved Domains (5) summary
    smart00250
    Location:19762012
    PLEC; Plectin repeat
    cd00014
    Location:47154
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:627816
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:169267
    CH; Calponin homology (CH) domain
    pfam00681
    Location:29232964
    Plectin; Plectin repeat
  29. XM_005250978.4XP_005251035.1  plectin isoform X1

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (10) summary
    smart00250
    Location:31033139
    PLEC; Plectin repeat
    cd00014
    Location:47154
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:627816
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:169267
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40504091
    Plectin; Plectin repeat
    pfam01576
    Location:13522475
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14521463
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17351937
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13611488
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14871607
    ATP-synt_B; ATP synthase B/B' CF(0)
  30. XM_047421887.1XP_047277843.1  plectin isoform X29

  31. XM_047421873.1XP_047277829.1  plectin isoform X10

  32. XM_047421886.1XP_047277842.1  plectin isoform X28

  33. XM_005250980.5XP_005251037.1  plectin isoform X9

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (10) summary
    smart00250
    Location:30993135
    PLEC; Plectin repeat
    cd00014
    Location:43150
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:623812
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:165263
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40464087
    Plectin; Plectin repeat
    pfam01576
    Location:13482471
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14481459
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17311933
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13571484
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14831603
    ATP-synt_B; ATP synthase B/B' CF(0)
  34. XM_011517131.3XP_011515433.1  plectin isoform X17

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (10) summary
    smart00250
    Location:30713107
    PLEC; Plectin repeat
    cd00014
    Location:20122
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:595784
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:137235
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40184059
    Plectin; Plectin repeat
    pfam01576
    Location:13202443
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14201431
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17031905
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13291456
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14551575
    ATP-synt_B; ATP synthase B/B' CF(0)
  35. XM_006716590.4XP_006716653.1  plectin isoform X16

    UniProtKB/TrEMBL
    A0A8I5KYZ1
    Conserved Domains (10) summary
    smart00250
    Location:30763112
    PLEC; Plectin repeat
    cd00014
    Location:20127
    CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
    cd00176
    Location:600789
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    pfam00307
    Location:142240
    CH; Calponin homology (CH) domain
    pfam00681
    Location:40234064
    Plectin; Plectin repeat
    pfam01576
    Location:13252448
    Myosin_tail_1; Myosin tail
    cd16269
    Location:14251436
    GBP_C; coiled coil [structural motif]
    cl02488
    Location:17081910
    SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
    cl20817
    Location:13341461
    GBP_C; Guanylate-binding protein, C-terminal domain
    cl21478
    Location:14601580
    ATP-synt_B; ATP synthase B/B' CF(0)
  36. XM_047421879.1XP_047277835.1  plectin isoform X22

    UniProtKB/TrEMBL
    A0A8I5KSD5
    Related
    ENSP00000510788.1, ENST00000687971.1

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    145073432..145135033 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054360666.1XP_054216641.1  plectin isoform X7

  2. XM_054360665.1XP_054216640.1  plectin isoform X6

  3. XM_054360690.1XP_054216665.1  plectin isoform X32

  4. XM_054360673.1XP_054216648.1  plectin isoform X14

  5. XM_054360689.1XP_054216664.1  plectin isoform X31

  6. XM_054360671.1XP_054216646.1  plectin isoform X12

  7. XM_054360693.1XP_054216668.1  plectin isoform X35

  8. XM_054360678.1XP_054216653.1  plectin isoform X19

  9. XM_054360691.1XP_054216666.1  plectin isoform X33

  10. XM_054360672.1XP_054216647.1  plectin isoform X13

  11. XM_054360685.1XP_054216660.1  plectin isoform X27

  12. XM_054360664.1XP_054216639.1  plectin isoform X5

  13. XM_054360684.1XP_054216659.1  plectin isoform X26

  14. XM_054360663.1XP_054216638.1  plectin isoform X4

  15. XM_054360679.1XP_054216654.1  plectin isoform X20

  16. XM_054360674.1XP_054216649.1  plectin isoform X15

  17. XM_054360677.1XP_054216652.1  plectin isoform X18

    UniProtKB/TrEMBL
    A0A8I5KUE3
  18. XM_054360694.1XP_054216669.1  plectin isoform X36

  19. XM_054360692.1XP_054216667.1  plectin isoform X34

  20. XM_054360680.1XP_054216655.1  plectin isoform X21

  21. XM_054360688.1XP_054216663.1  plectin isoform X30

  22. XM_054360670.1XP_054216645.1  plectin isoform X11

  23. XM_054360667.1XP_054216642.1  plectin isoform X8

  24. XM_054360683.1XP_054216658.1  plectin isoform X25

  25. XM_054360662.1XP_054216637.1  plectin isoform X3

  26. XM_054360682.1XP_054216657.1  plectin isoform X24

  27. XM_054360661.1XP_054216636.1  plectin isoform X2

  28. XM_054360681.1XP_054216656.1  plectin isoform X23

  29. XM_054360660.1XP_054216635.1  plectin isoform X1

  30. XM_054360687.1XP_054216662.1  plectin isoform X29

  31. XM_054360669.1XP_054216644.1  plectin isoform X10

  32. XM_054360686.1XP_054216661.1  plectin isoform X28

  33. XM_054360668.1XP_054216643.1  plectin isoform X9

  34. XM_054360675.1XP_054216650.1  plectin isoform X16

  35. XM_054360676.1XP_054216651.1  plectin isoform X17