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DDB_G0277149 hypothetical protein [ Dictyostelium discoideum AX4 ]

Gene ID: 8621222, updated on 17-May-2024

Summary

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Gene symbol
DDB_G0277149
Gene description
hypothetical protein
Primary source
dictyBase:DDB_G0277149
Locus tag
DDB_G0277149
See related
AmoebaDB:DDB_G0277149; VEuPathDB:DDB_G0277149
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Dictyostelium discoideum AX4 (strain: AX4)
Lineage
Eukaryota; Amoebozoa; Mycetozoa; Dictyosteliida; Dictyostelium
Old locus tag
DDBDRAFT_0169127; DDB_0169127
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Genomic context

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Location:
chromosome: 2
Exon count:
3
Sequence:
Chromosome: 2; NC_007088.5 (7777377..7778542)

Chromosome 2 - NC_007088.5Genomic Context describing neighboring genes Neighboring gene pmp22 family protein Neighboring gene beta-lactamase family protein Neighboring gene PHD zinc finger-containing protein Neighboring gene TRAF-type zinc finger-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_007088.5

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 2 of Dictyostelium discoideum. Glöckner G, et al. Nature, 2002 Jul 4. PMID 12097910
  2. The genome of the social amoeba Dictyostelium discoideum. Eichinger L, et al. Nature, 2005 May 5. PMID 15875012, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
hypothetical protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_007088.5 Reference assembly

    Range
    7777377..7778542
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_637653.1 → XP_642745.1  hypothetical protein DDB_G0277149 [Dictyostelium discoideum AX4]

    See identical proteins and their annotated locations for XP_642745.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q54ZX1, Q86K48
    Conserved Domains (4) summary
    cd05804
    Location:113 → 152
    StaR_like; StaR_like; a well-conserved protein found in bacteria, plants, and animals. A family member from Streptomyces toyocaensis, StaR is part of a gene cluster involved in the biosynthesis of glycopeptide antibiotics (GPAs), specifically A47934. It has been ...
    sd00006
    Location:141 → 171
    TPR; TPR repeat [structural motif]
    pfam13432
    Location:118 → 172
    TPR_16; Tetratricopeptide repeat
    cl00687
    Location:82 → 114
    AdoMet_dc; S-adenosylmethionine decarboxylase
Nucleotide Protein
Heading Accession and Version

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