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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001190971.2 → NP_001177900.1 piwi-like protein 1 isoform 2
See identical proteins and their annotated locations for NP_001177900.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has an alternate 3' sequence, as compared to variant 1. The resulting isoform (2) is shorter and has a different C-terminus, as compared to isoform 1.
- Source sequence(s)
-
AC127071, AK093133, BC028581, DB072454
- UniProtKB/Swiss-Prot
-
Q96J94
- Conserved Domains (5) summary
-
- smart00949
Location:277 → 415
- PAZ; This domain is named PAZ after the proteins Piwi Argonaut and Zwille
- cd04658
Location:401 → 823
- Piwi_piwi-like_Euk; Piwi_piwi-like_Euk: PIWI domain, Piwi-like subfamily found in eukaryotes. This domain is found in Piwi and closely related proteins, where it is believed to perform a crucial role in germline cells, via RNA silencing. RNA silencing refers to a group of ...
- pfam05831
Location:16 → 106
- GAGE; GAGE protein
- pfam08699
Location:228 → 273
- ArgoL1; Argonaute linker 1 domain
- pfam16486
Location:106 → 216
- ArgoN; N-terminal domain of argonaute
-
NM_004764.5 → NP_004755.2 piwi-like protein 1 isoform 1
See identical proteins and their annotated locations for NP_004755.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AC127071, AF104260, BC028581, DB072454, DB527532
- Consensus CDS
-
CCDS9268.1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
- Related
- ENSP00000245255.3, ENST00000245255.7
- Conserved Domains (4) summary
-
- smart00949
Location:277 → 415
- PAZ; This domain is named PAZ after the proteins Piwi Argonaut and Zwille
- cd04658
Location:401 → 844
- Piwi_piwi-like_Euk; Piwi_piwi-like_Euk: PIWI domain, Piwi-like subfamily found in eukaryotes. This domain is found in Piwi and closely related proteins, where it is believed to perform a crucial role in germline cells, via RNA silencing. RNA silencing refers to a group of ...
- pfam05831
Location:16 → 106
- GAGE; GAGE protein
- pfam08699
Location:227 → 273
- ArgoL1; Argonaute linker 1 domain
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000012.12 Reference GRCh38.p14 Primary Assembly
- Range
-
130337887..130426260
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011539002.4 → XP_011537304.1 piwi-like protein 1 isoform X1
See identical proteins and their annotated locations for XP_011537304.1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
- Conserved Domains (4) summary
-
- smart00949
Location:277 → 415
- PAZ; This domain is named PAZ after the proteins Piwi Argonaut and Zwille
- cd04658
Location:401 → 844
- Piwi_piwi-like_Euk; Piwi_piwi-like_Euk: PIWI domain, Piwi-like subfamily found in eukaryotes. This domain is found in Piwi and closely related proteins, where it is believed to perform a crucial role in germline cells, via RNA silencing. RNA silencing refers to a group of ...
- pfam05831
Location:16 → 106
- GAGE; GAGE protein
- pfam08699
Location:227 → 273
- ArgoL1; Argonaute linker 1 domain
-
XM_047429892.1 → XP_047285848.1 piwi-like protein 1 isoform X2
-
XM_011539003.4 → XP_011537305.1 piwi-like protein 1 isoform X1
See identical proteins and their annotated locations for XP_011537305.1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
- Conserved Domains (4) summary
-
- smart00949
Location:277 → 415
- PAZ; This domain is named PAZ after the proteins Piwi Argonaut and Zwille
- cd04658
Location:401 → 844
- Piwi_piwi-like_Euk; Piwi_piwi-like_Euk: PIWI domain, Piwi-like subfamily found in eukaryotes. This domain is found in Piwi and closely related proteins, where it is believed to perform a crucial role in germline cells, via RNA silencing. RNA silencing refers to a group of ...
- pfam05831
Location:16 → 106
- GAGE; GAGE protein
- pfam08699
Location:227 → 273
- ArgoL1; Argonaute linker 1 domain
-
XM_024449277.2 → XP_024305045.1 piwi-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
- Conserved Domains (4) summary
-
- smart00949
Location:277 → 415
- PAZ; This domain is named PAZ after the proteins Piwi Argonaut and Zwille
- cd04658
Location:401 → 844
- Piwi_piwi-like_Euk; Piwi_piwi-like_Euk: PIWI domain, Piwi-like subfamily found in eukaryotes. This domain is found in Piwi and closely related proteins, where it is believed to perform a crucial role in germline cells, via RNA silencing. RNA silencing refers to a group of ...
- pfam05831
Location:16 → 106
- GAGE; GAGE protein
- pfam08699
Location:227 → 273
- ArgoL1; Argonaute linker 1 domain
-
XM_011539004.4 → XP_011537306.1 piwi-like protein 1 isoform X1
See identical proteins and their annotated locations for XP_011537306.1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
- Conserved Domains (4) summary
-
- smart00949
Location:277 → 415
- PAZ; This domain is named PAZ after the proteins Piwi Argonaut and Zwille
- cd04658
Location:401 → 844
- Piwi_piwi-like_Euk; Piwi_piwi-like_Euk: PIWI domain, Piwi-like subfamily found in eukaryotes. This domain is found in Piwi and closely related proteins, where it is believed to perform a crucial role in germline cells, via RNA silencing. RNA silencing refers to a group of ...
- pfam05831
Location:16 → 106
- GAGE; GAGE protein
- pfam08699
Location:227 → 273
- ArgoL1; Argonaute linker 1 domain
-
XM_011539006.4 → XP_011537308.1 piwi-like protein 1 isoform X3
- Conserved Domains (2) summary
-
- smart00949
Location:1 → 35
- PAZ; This domain is named PAZ after the proteins Piwi Argonaut and Zwille
- cd04658
Location:21 → 464
- Piwi_piwi-like_Euk; Piwi_piwi-like_Euk: PIWI domain, Piwi-like subfamily found in eukaryotes. This domain is found in Piwi and closely related proteins, where it is believed to perform a crucial role in germline cells, via RNA silencing. RNA silencing refers to a group of ...
RNA
-
XR_007063144.1 RNA Sequence
Reference GRCh38.p14 ALT_REF_LOCI_1
Genomic
-
NT_187589.1 Reference GRCh38.p14 ALT_REF_LOCI_1
- Range
-
14800..49543
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054328934.1 → XP_054184909.1 piwi-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
-
XM_054328938.1 → XP_054184913.1 piwi-like protein 1 isoform X2
-
XM_054328935.1 → XP_054184910.1 piwi-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
-
XM_054328937.1 → XP_054184912.1 piwi-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
-
XM_054328936.1 → XP_054184911.1 piwi-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
Alternate T2T-CHM13v2.0
Genomic
-
NC_060936.1 Alternate T2T-CHM13v2.0
- Range
-
130374979..130463542
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054373853.1 → XP_054229828.1 piwi-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
-
XM_054373857.1 → XP_054229832.1 piwi-like protein 1 isoform X2
-
XM_054373854.1 → XP_054229829.1 piwi-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
-
XM_054373856.1 → XP_054229831.1 piwi-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
-
XM_054373855.1 → XP_054229830.1 piwi-like protein 1 isoform X1
- UniProtKB/Swiss-Prot
- A4F266, O95404, Q8NA60, Q8TBY5, Q96J94, Q96JD5
-
XM_054373858.1 → XP_054229833.1 piwi-like protein 1 isoform X3
RNA
-
XR_008488712.1 RNA Sequence