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    LOC4334219 dof zinc finger protein 4-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4334219, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4334219
    Gene description
    dof zinc finger protein 4-like
    Locus tag
    OSNPB_030764900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4334219 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 3 NC_089037.1 (32633236..32634913, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 3 NC_029258.1 (31662277..31663969, complement)

    Chromosome 3 - NC_089037.1Genomic Context describing neighboring genes Neighboring gene transcription factor HHO5 Neighboring gene serine/threonine-protein kinase SAPK8-like Neighboring gene serine/threonine-protein kinase Aurora-3 Neighboring gene protein TUNICAMYCIN INDUCED 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dof zinc finger protein 4-like
    Names
    Dof-type zinc finger protein 09
    Os03g0764900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089037.1 Reference ASM3414082v1 Primary Assembly

      Range
      32633236..32634913 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015773932.3 → XP_015629418.1  dof zinc finger protein 4-like

      UniProtKB/TrEMBL
      A2XMA2, Q0DNA2, Q10EQ1, Q7Y0C1
      Conserved Domains (1) summary
      pfam02701
      Location:78 → 132
      zf-Dof; Dof domain, zinc finger
    Nucleotide Protein
    Heading Accession and Version

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