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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001320044.2 → NP_001306973.1 sterol regulatory element-binding protein cleavage-activating protein isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) has multiple differences compared to variant 1. These differences result in a distinct 5' UTR and cause translation initiation at a downstream start codon, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AC099778, AK300311, BG179218, CN313163
- UniProtKB/TrEMBL
-
B7Z6H0
- Conserved Domains (4) summary
-
- COG2319
Location:683 → 979
- WD40; WD40 repeat [General function prediction only]
- pfam12349
Location:53 → 202
- Sterol-sensing; Sterol-sensing domain of SREBP cleavage-activation
- sd00039
Location:703 → 749
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:822 → 979
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
NM_012235.4 → NP_036367.2 sterol regulatory element-binding protein cleavage-activating protein isoform 1
See identical proteins and their annotated locations for NP_036367.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC099778, BG179218, D83782
- Consensus CDS
-
CCDS2755.2
- UniProtKB/Swiss-Prot
- Q12770, Q8N2E0, Q8WUA1
- Related
- ENSP00000265565.5, ENST00000265565.10
- Conserved Domains (4) summary
-
- COG2319
Location:939 → 1235
- WD40; WD40 repeat [General function prediction only]
- pfam12349
Location:308 → 457
- Sterol-sensing; Sterol-sensing domain of SREBP cleavage-activation
- sd00039
Location:959 → 1005
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:1078 → 1235
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000003.12 Reference GRCh38.p14 Primary Assembly
- Range
-
47413681..47477127 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011533501.2 → XP_011531803.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
See identical proteins and their annotated locations for XP_011531803.1
- UniProtKB/Swiss-Prot
- Q12770, Q8N2E0, Q8WUA1
- Conserved Domains (4) summary
-
- COG2319
Location:939 → 1235
- WD40; WD40 repeat [General function prediction only]
- pfam12349
Location:308 → 457
- Sterol-sensing; Sterol-sensing domain of SREBP cleavage-activation
- sd00039
Location:959 → 1005
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:1078 → 1235
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_005264967.3 → XP_005265024.1 sterol regulatory element-binding protein cleavage-activating protein isoform X2
- UniProtKB/TrEMBL
-
B7Z6H0
- Conserved Domains (4) summary
-
- COG2319
Location:938 → 1234
- WD40; WD40 repeat [General function prediction only]
- pfam12349
Location:308 → 457
- Sterol-sensing; Sterol-sensing domain of SREBP cleavage-activation
- sd00039
Location:958 → 1004
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:1077 → 1234
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047447740.1 → XP_047303696.1 sterol regulatory element-binding protein cleavage-activating protein isoform X2
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_017005918.2 → XP_016861407.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
- UniProtKB/Swiss-Prot
- Q12770, Q8N2E0, Q8WUA1
- Conserved Domains (4) summary
-
- COG2319
Location:939 → 1235
- WD40; WD40 repeat [General function prediction only]
- pfam12349
Location:308 → 457
- Sterol-sensing; Sterol-sensing domain of SREBP cleavage-activation
- sd00039
Location:959 → 1005
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:1078 → 1235
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
-
XM_047447739.1 → XP_047303695.1 sterol regulatory element-binding protein cleavage-activating protein isoform X2
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_047447737.1 → XP_047303693.1 sterol regulatory element-binding protein cleavage-activating protein isoform X2
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_047447732.1 → XP_047303688.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
- UniProtKB/Swiss-Prot
- Q12770, Q8N2E0, Q8WUA1
-
XM_047447738.1 → XP_047303694.1 sterol regulatory element-binding protein cleavage-activating protein isoform X2
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_047447734.1 → XP_047303690.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
- UniProtKB/Swiss-Prot
- Q12770, Q8N2E0, Q8WUA1
-
XM_047447736.1 → XP_047303692.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
- UniProtKB/Swiss-Prot
- Q12770, Q8N2E0, Q8WUA1
-
XM_047447733.1 → XP_047303689.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
- UniProtKB/Swiss-Prot
- Q12770, Q8N2E0, Q8WUA1
-
XM_047447735.1 → XP_047303691.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
- UniProtKB/Swiss-Prot
- Q12770, Q8N2E0, Q8WUA1
- Related
- ENSP00000497087.1, ENST00000648151.1
-
XM_047447744.1 → XP_047303700.1 sterol regulatory element-binding protein cleavage-activating protein isoform X7
- UniProtKB/TrEMBL
-
A8K619
-
XM_047447742.1 → XP_047303698.1 sterol regulatory element-binding protein cleavage-activating protein isoform X4
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_047447741.1 → XP_047303697.1 sterol regulatory element-binding protein cleavage-activating protein isoform X3
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_047447743.1 → XP_047303699.1 sterol regulatory element-binding protein cleavage-activating protein isoform X6
- UniProtKB/TrEMBL
-
A8K619
-
XM_011533502.4 → XP_011531804.1 sterol regulatory element-binding protein cleavage-activating protein isoform X5
- UniProtKB/TrEMBL
-
A8K619
- Conserved Domains (4) summary
-
- COG2319
Location:558 → 854
- WD40; WD40 repeat [General function prediction only]
- sd00039
Location:578 → 624
- 7WD40; WD40 repeat [structural motif]
- cl02567
Location:697 → 854
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- cl21543
Location:3 → 76
- MMPL; MMPL family
Alternate T2T-CHM13v2.0
Genomic
-
NC_060927.1 Alternate T2T-CHM13v2.0
- Range
-
47430101..47496247 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054345725.1 → XP_054201700.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
-
XM_054345727.1 → XP_054201702.1 sterol regulatory element-binding protein cleavage-activating protein isoform X2
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_054345731.1 → XP_054201706.1 sterol regulatory element-binding protein cleavage-activating protein isoform X2
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_054345722.1 → XP_054201697.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
-
XM_054345730.1 → XP_054201705.1 sterol regulatory element-binding protein cleavage-activating protein isoform X2
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_054345728.1 → XP_054201703.1 sterol regulatory element-binding protein cleavage-activating protein isoform X2
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_054345721.1 → XP_054201696.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
-
XM_054345729.1 → XP_054201704.1 sterol regulatory element-binding protein cleavage-activating protein isoform X2
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_054345724.1 → XP_054201699.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
-
XM_054345726.1 → XP_054201701.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
-
XM_054345723.1 → XP_054201698.1 sterol regulatory element-binding protein cleavage-activating protein isoform X1
-
XM_054345733.1 → XP_054201708.1 sterol regulatory element-binding protein cleavage-activating protein isoform X4
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_054345736.1 → XP_054201711.1 sterol regulatory element-binding protein cleavage-activating protein isoform X7
- UniProtKB/TrEMBL
-
A8K619
-
XM_054345732.1 → XP_054201707.1 sterol regulatory element-binding protein cleavage-activating protein isoform X3
- UniProtKB/TrEMBL
-
B7Z6H0
-
XM_054345735.1 → XP_054201710.1 sterol regulatory element-binding protein cleavage-activating protein isoform X6
- UniProtKB/TrEMBL
-
A8K619
-
XM_054345734.1 → XP_054201709.1 sterol regulatory element-binding protein cleavage-activating protein isoform X5
- UniProtKB/TrEMBL
-
A8K619