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    LOC4326740 late embryogenesis abundant protein Lea14-A [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4326740, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4326740
    Gene description
    late embryogenesis abundant protein Lea14-A
    Locus tag
    OSNPB_010225600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0443E07.9
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    Genomic context

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    See LOC4326740 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (6932634..6934192, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (6922131..6922766, complement)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like Neighboring gene 3-methyl-2-oxobutanoate hydroxymethyltransferase 2, mitochondrial Neighboring gene uncharacterized LOC136354937 Neighboring gene probable membrane-associated kinase regulator 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in response to desiccation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    late embryogenesis abundant protein Lea14-A
    Names
    Os01g0225600
    P0492F05.18
    putative late embryogenesis-abundant protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      6932634..6934192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015769594.3 → XP_015625080.1  late embryogenesis abundant protein Lea14-A

      UniProtKB/TrEMBL
      A0A5S6RA95, A2ZQV7, Q0JPF3, Q7F794, Q9AWZ5
      Conserved Domains (1) summary
      pfam03168
      Location:44 → 140
      LEA_2; Late embryogenesis abundant protein
    Nucleotide Protein
    Heading Accession and Version

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