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    LOC4330477 protein KINESIN LIGHT CHAIN-RELATED 2 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4330477, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4330477
    Gene description
    protein KINESIN LIGHT CHAIN-RELATED 2
    Locus tag
    OSNPB_020708400
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    49D11.11
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    Genomic context

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    See LOC4330477 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (29779228..29783080, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (29287705..29291629, complement)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene inorganic pyrophosphatase TTM1 Neighboring gene uncharacterized LOC4330476 Neighboring gene histone-lysine N-methyltransferase SUVR5 Neighboring gene RNA exonuclease 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein KINESIN LIGHT CHAIN-RELATED 2
    Names
    OSJNBb0060O16.28
    Os02g0708400
    putative kinesin light chain

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      29779228..29783080 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015770294.2 → XP_015625780.1  protein KINESIN LIGHT CHAIN-RELATED 2

      UniProtKB/TrEMBL
      B8AHA5, B9F215, Q0DY91, Q8S3S1
      Conserved Domains (3) summary
      COG0457
      Location:265 → 533
      TPR; Tetratricopeptide (TPR) repeat [General function prediction only]
      sd00006
      Location:416 → 444
      TPR; TPR repeat [structural motif]
      pfam13424
      Location:586 → 658
      TPR_12; Tetratricopeptide repeat
    Nucleotide Protein
    Heading Accession and Version

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