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    LOC4343033 protein TsetseEP [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4343033, updated on 19-Aug-2022

    Summary

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    Gene symbol
    LOC4343033
    Gene description
    protein TsetseEP
    Locus tag
    OSNPB_070418600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1123_B01.104
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    Genomic context

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    See LOC4343033 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    102 current IRGSP-1.0 (GCF_001433935.1) 7 NC_029262.1 (13354234..13355294, complement)

    Chromosome 7 - NC_029262.1Genomic Context describing neighboring genes Neighboring gene transfer RNA serine (anticodon GCU) Neighboring gene cytochrome P450 709B1 Neighboring gene protein TsetseEP Neighboring gene cytochrome P450 709B2-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_029262.1 Chromosome 7 Reference IRGSP-1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    protein TsetseEP
    Names
    Os07g0418600
    P0025D09.120

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference IRGSP-1.0 Primary Assembly

    Genomic

    1. NC_029262.1 Reference IRGSP-1.0 Primary Assembly

      Range
      13354234..13355294 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015789503.2 → XP_015644989.1  protein TsetseEP

      UniProtKB/TrEMBL
      A0A0N7KNB7, Q0D6Y7, Q8H5X2
      Conserved Domains (3) summary
      PRK09752
      Location:75 → 106
      PRK09752; AIDA-I family autotransporter YfaL
      PRK12270
      Location:34 → 114
      kgd; multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit
      NF033930
      Location:80 → 157
      pneumo_PspA; pneumococcal surface protein A
    Nucleotide Protein
    Heading Accession and Version

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