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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_047206.1 RefSeqGene
- Range
-
5672..53022
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001258452.2 → NP_001245381.1 F-box DNA helicase 1 isoform 3
See identical proteins and their annotated locations for NP_001245381.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) differs at the 5' end and contains an additional in-frame coding exon compared to variant 1, which results in translation initiation from an in-frame downstream AUG, and a shorter isoform (3) with an internal protein segment not found in isoform 1.
- Source sequence(s)
-
AF380349, AK122753, CN478453
- Consensus CDS
-
CCDS73064.1
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
- Conserved Domains (4) summary
-
- COG0210
Location:366 → 875
- UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
- pfam12937
Location:138 → 187
- F-box-like; F-box-like
- pfam13538
Location:814 → 875
- UvrD_C_2; UvrD-like helicase C-terminal domain
- cl21455
Location:367 → 611
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
-
NM_001258453.2 → NP_001245382.1 F-box DNA helicase 1 isoform 4
See identical proteins and their annotated locations for NP_001245382.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs at the 5' end compared to variant 1, resulting in translation initiation from an in-frame downstream AUG, and an isoform (4) with a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
BC110884, CN478453, DB099150
- UniProtKB/TrEMBL
- Q2TAK1, Q66K33
- Conserved Domains (2) summary
-
- COG0210
Location:366 → 858
- UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
- pfam12937
Location:138 → 185
- F-box-like; F-box-like
-
NM_032807.5 → NP_116196.3 F-box DNA helicase 1 isoform 1
See identical proteins and their annotated locations for NP_116196.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AF380349, CN478453
- Consensus CDS
-
CCDS7073.1
- UniProtKB/TrEMBL
-
Q14DG0
- Related
- ENSP00000369335.5, ENST00000379999.6
- Conserved Domains (4) summary
-
- COG0210
Location:491 → 983
- UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
- pfam12937
Location:263 → 312
- F-box-like; F-box-like
- pfam13538
Location:922 → 983
- UvrD_C_2; UvrD-like helicase C-terminal domain
- cl21455
Location:492 → 736
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
-
NM_178150.3 → NP_835363.1 F-box DNA helicase 1 isoform 2
See identical proteins and their annotated locations for NP_835363.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs at the 5' end compared to variant 1, resulting in translation initiation from an in-frame downstream AUG, and an isoform (2) with a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
BC113377, CN478453, DB099150
- Consensus CDS
-
CCDS7072.1
- UniProtKB/Swiss-Prot
- Q5JVB0, Q5JVB1, Q7Z4Q6, Q7Z4R0, Q8N1P5, Q8N586, Q8NFZ0, Q96E82, Q96K67, Q96SW7, Q9UFB2
- UniProtKB/TrEMBL
-
Q14DG0
- Related
- ENSP00000355415.4, ENST00000362091.9
- Conserved Domains (4) summary
-
- COG0210
Location:440 → 932
- UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
- pfam12937
Location:212 → 261
- F-box-like; F-box-like
- pfam13538
Location:871 → 932
- UvrD_C_2; UvrD-like helicase C-terminal domain
- cl21455
Location:441 → 685
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000010.11 Reference GRCh38.p14 Primary Assembly
- Range
-
5889572..5937593
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047425892.1 → XP_047281848.1 F-box DNA helicase 1 isoform X1
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_047425900.1 → XP_047281856.1 F-box DNA helicase 1 isoform X5
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_047425896.1 → XP_047281852.1 F-box DNA helicase 1 isoform X7
- UniProtKB/Swiss-Prot
- Q5JVB0, Q5JVB1, Q7Z4Q6, Q7Z4R0, Q8N1P5, Q8N586, Q8NFZ0, Q96E82, Q96K67, Q96SW7, Q9UFB2
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_047425904.1 → XP_047281860.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
- Related
- ENSP00000380439.4, ENST00000397269.7
-
XM_047425901.1 → XP_047281857.1 F-box DNA helicase 1 isoform X9
- UniProtKB/TrEMBL
- Q2TAK1, Q66K33
-
XM_047425894.1 → XP_047281850.1 F-box DNA helicase 1 isoform X5
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_047425895.1 → XP_047281851.1 F-box DNA helicase 1 isoform X7
- UniProtKB/Swiss-Prot
- Q5JVB0, Q5JVB1, Q7Z4Q6, Q7Z4R0, Q8N1P5, Q8N586, Q8NFZ0, Q96E82, Q96K67, Q96SW7, Q9UFB2
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_047425898.1 → XP_047281854.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
-
XM_047425902.1 → XP_047281858.1 F-box DNA helicase 1 isoform X9
- UniProtKB/TrEMBL
- Q2TAK1, Q66K33
-
XM_017016844.3 → XP_016872333.1 F-box DNA helicase 1 isoform X4
- UniProtKB/TrEMBL
-
Q14DG0
- Conserved Domains (4) summary
-
- COG0210
Location:440 → 949
- UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
- pfam12937
Location:212 → 261
- F-box-like; F-box-like
- pfam13538
Location:888 → 949
- UvrD_C_2; UvrD-like helicase C-terminal domain
- cl21455
Location:441 → 685
- P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
-
XM_024448240.2 → XP_024304008.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
-
XM_024448241.2 → XP_024304009.1 F-box DNA helicase 1 isoform X9
- UniProtKB/TrEMBL
- Q2TAK1, Q66K33
- Conserved Domains (2) summary
-
- COG0210
Location:366 → 858
- UvrD; Superfamily I DNA or RNA helicase [Replication, recombination and repair]
- pfam12937
Location:138 → 185
- F-box-like; F-box-like
-
XM_047425906.1 → XP_047281862.1 F-box DNA helicase 1 isoform X11
-
XM_047425907.1 → XP_047281863.1 F-box DNA helicase 1 isoform X12
-
XM_047425897.1 → XP_047281853.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
-
XM_017016842.2 → XP_016872331.1 F-box DNA helicase 1 isoform X3
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_017016845.2 → XP_016872334.1 F-box DNA helicase 1 isoform X6
- UniProtKB/TrEMBL
-
Q66K33
-
XM_047425893.1 → XP_047281849.1 F-box DNA helicase 1 isoform X2
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_047425903.1 → XP_047281859.1 F-box DNA helicase 1 isoform X10
-
XM_047425905.1 → XP_047281861.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
-
XM_047425899.1 → XP_047281855.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
RNA
-
XR_007062013.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060934.1 Alternate T2T-CHM13v2.0
- Range
-
5890100..5938280
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054367002.1 → XP_054222977.1 F-box DNA helicase 1 isoform X3
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_054367012.1 → XP_054222987.1 F-box DNA helicase 1 isoform X5
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_054367007.1 → XP_054222982.1 F-box DNA helicase 1 isoform X7
- UniProtKB/Swiss-Prot
- Q5JVB0, Q5JVB1, Q7Z4Q6, Q7Z4R0, Q8N1P5, Q8N586, Q8NFZ0, Q96E82, Q96K67, Q96SW7, Q9UFB2
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_054367017.1 → XP_054222992.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
-
XM_054367013.1 → XP_054222988.1 F-box DNA helicase 1 isoform X9
- UniProtKB/TrEMBL
- Q2TAK1, Q66K33
-
XM_054367004.1 → XP_054222979.1 F-box DNA helicase 1 isoform X5
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_054367006.1 → XP_054222981.1 F-box DNA helicase 1 isoform X7
- UniProtKB/Swiss-Prot
- Q5JVB0, Q5JVB1, Q7Z4Q6, Q7Z4R0, Q8N1P5, Q8N586, Q8NFZ0, Q96E82, Q96K67, Q96SW7, Q9UFB2
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_054367010.1 → XP_054222985.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
-
XM_054367015.1 → XP_054222990.1 F-box DNA helicase 1 isoform X9
- UniProtKB/TrEMBL
- Q2TAK1, Q66K33
-
XM_054367003.1 → XP_054222978.1 F-box DNA helicase 1 isoform X4
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_054367008.1 → XP_054222983.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
-
XM_054367014.1 → XP_054222989.1 F-box DNA helicase 1 isoform X9
- UniProtKB/TrEMBL
- Q2TAK1, Q66K33
-
XM_054367019.1 → XP_054222994.1 F-box DNA helicase 1 isoform X11
-
XM_054367020.1 → XP_054222995.1 F-box DNA helicase 1 isoform X12
-
XM_054367009.1 → XP_054222984.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
-
XM_054367005.1 → XP_054222980.1 F-box DNA helicase 1 isoform X6
- UniProtKB/TrEMBL
-
Q66K33
-
XM_054367000.1 → XP_054222975.1 F-box DNA helicase 1 isoform X1
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_054367016.1 → XP_054222991.1 F-box DNA helicase 1 isoform X10
-
XM_054367001.1 → XP_054222976.1 F-box DNA helicase 1 isoform X2
- UniProtKB/TrEMBL
-
Q14DG0
-
XM_054367018.1 → XP_054222993.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
-
XM_054367011.1 → XP_054222986.1 F-box DNA helicase 1 isoform X8
- UniProtKB/TrEMBL
- F6UZG9, Q66K33
RNA
-
XR_008488304.1 RNA Sequence