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    map7b microtubule-associated protein 7b [ Danio rerio (zebrafish) ]

    Gene ID: 563520, updated on 2-Nov-2024

    Summary

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    Official Symbol
    map7bprovided by ZNC
    Official Full Name
    microtubule-associated protein 7bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-090313-100
    See related
    Ensembl:ENSDARG00000104435 AllianceGenome:ZFIN:ZDB-GENE-090313-100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    map7; im:7145684; si:ch73-217b7.1; si:ch211-257b22.1
    Summary
    Predicted to act upstream of or within microtubule cytoskeleton organization. Predicted to be located in microtubule cytoskeleton. Orthologous to human MAP7 (microtubule associated protein 7). [provided by Alliance of Genome Resources, Nov 2024]
    Orthologs
    human mouse all
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    Genomic context

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    See map7b in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 23 NC_007134.7 (39854592..39942118)
    105 previous assembly GRCz10 (GCF_000002035.5) 23 NC_007134.6 (39961687..40049207)

    Chromosome 23 - NC_007134.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137489147 Neighboring gene protein phosphatase 1, regulatory (inhibitor) subunit 14C Neighboring gene chemokine XC receptor 1-like Neighboring gene chemokine XC receptor 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Hematopoietic gene expression profile in zebrafish kidney marrow. Song HD, et al. Proc Natl Acad Sci U S A, 2004 Nov 16. PMID 15520368, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    4. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ensconsin
    Names
    microtubule-associated protein 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007134.7 Reference GRCz11 Primary Assembly

      Range
      39854592..39942118
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021470034.2 → XP_021325709.1  ensconsin isoform X3

      UniProtKB/TrEMBL
      A0A8M9PLC6
      Conserved Domains (3) summary
      pfam05672
      Location:512 → 663
      MAP7; MAP7 (E-MAP-115) family
      cl25496
      Location:323 → 520
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      cl25549
      Location:65 → 151
      ARGLU; Arginine and glutamate-rich 1

    2. XM_009297084.3 → XP_009295359.1  ensconsin isoform X9

      UniProtKB/TrEMBL
      A0A8M3B6E0
      Conserved Domains (2) summary
      pfam05672
      Location:479 → 630
      MAP7; MAP7 (E-MAP-115) family
      pfam11208
      Location:68 → 131
      DUF2992; Protein of unknown function (DUF2992)

    3. XM_021470038.2 → XP_021325713.1  ensconsin isoform X10

      UniProtKB/TrEMBL
      A0A0R4IVW1, A0A8M9PFN5
      Related
      ENSDARP00000140719.1, ENSDART00000161881.2
      Conserved Domains (3) summary
      pfam05672
      Location:471 → 622
      MAP7; MAP7 (E-MAP-115) family
      cl25496
      Location:352 → 479
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      cl25549
      Location:65 → 151
      ARGLU; Arginine and glutamate-rich 1

    4. XM_009297087.3 → XP_009295362.1  ensconsin isoform X12

      UniProtKB/TrEMBL
      A0A8M3AYS4
      Conserved Domains (2) summary
      pfam05672
      Location:437 → 588
      MAP7; MAP7 (E-MAP-115) family
      pfam11208
      Location:68 → 131
      DUF2992; Protein of unknown function (DUF2992)

    5. XM_068216943.1 → XP_068073044.1  ensconsin isoform X1

    6. XM_068216944.1 → XP_068073045.1  ensconsin isoform X2

    7. XM_068216946.1 → XP_068073047.1  ensconsin isoform X5

    8. XM_068216948.1 → XP_068073049.1  ensconsin isoform X8

    9. XM_068216945.1 → XP_068073046.1  ensconsin isoform X4

    10. XM_068216947.1 → XP_068073048.1  ensconsin isoform X7

    11. XM_068216949.1 → XP_068073050.1  ensconsin isoform X11

    12. XM_021470036.2 → XP_021325711.1  ensconsin isoform X6

      UniProtKB/TrEMBL
      A0A8M9PTQ2
      Conserved Domains (3) summary
      pfam05672
      Location:502 → 653
      MAP7; MAP7 (E-MAP-115) family
      cl25496
      Location:313 → 510
      Herpes_BLLF1; Herpes virus major outer envelope glycoprotein (BLLF1)
      cl25549
      Location:55 → 141
      ARGLU; Arginine and glutamate-rich 1
    Nucleotide Protein Strain
    Heading Accession and Version

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