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    LOC4348108 uncharacterized LOC4348108 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4348108, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4348108
    Gene description
    uncharacterized LOC4348108
    Locus tag
    OSNPB_100147900
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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    Genomic context

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    See LOC4348108 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 10 NC_089044.1 (2894377..2898601, complement)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 10 NC_029265.1 (2887358..2889820, complement)

    Chromosome 10 - NC_089044.1Genomic Context describing neighboring genes Neighboring gene homeobox-leucine zipper protein HOX9-like Neighboring gene auxin transporter-like protein 3 Neighboring gene probable non-specific lipid-transfer protein AKCS9 Neighboring gene proline-rich protein 2 Neighboring gene protein NRT1/ PTR FAMILY 5.10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC4348108
    Names
    Os10g0147900

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089044.1 Reference ASM3414082v1 Primary Assembly

      Range
      2894377..2898601 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015759109.3 → XP_015614595.1  uncharacterized protein LOC4348108

      UniProtKB/TrEMBL
      B8BFR3, Q0IYY8, Q33B25
      Conserved Domains (2) summary
      PLN03200
      Location:170 → 303
      PLN03200; cellulose synthase-interactive protein; Provisional
      sd00043
      Location:199 → 229
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version

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