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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001039877.2 → NP_001034966.1 striatin-4 isoform 2
See identical proteins and their annotated locations for NP_001034966.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) represents the longer transcript and encodes the longer isoform (2).
- Source sequence(s)
-
AB209003, AF212940, DA510367
- Consensus CDS
-
CCDS42581.1
- UniProtKB/TrEMBL
-
Q59GV6
- Related
- ENSP00000375777.1, ENST00000391910.7
- Conserved Domains (4) summary
-
- COG2319
Location:423 → 753
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:437 → 759
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam08232
Location:64 → 189
- Striatin; Striatin family
- sd00039
Location:450 → 496
- 7WD40; WD40 repeat [structural motif]
-
NM_013403.3 → NP_037535.2 striatin-4 isoform 1
See identical proteins and their annotated locations for NP_037535.2
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) uses an alternate splice site in the central coding region, compared to variant 2. The resulting isoform (1) lacks an internal 7-aa segment, compared to isoform 2.
- Source sequence(s)
-
AF212940, BC034604, DA510367
- Consensus CDS
-
CCDS12690.1
- UniProtKB/Swiss-Prot
- A0A024R0V2, B4DQH7, F8VYA6, Q8NE53, Q9NRL3
- UniProtKB/TrEMBL
-
Q59GV6
- Related
- ENSP00000263280.4, ENST00000263280.11
- Conserved Domains (4) summary
-
- COG2319
Location:416 → 746
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:430 → 752
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam08232
Location:64 → 189
- Striatin; Striatin family
- sd00039
Location:443 → 489
- 7WD40; WD40 repeat [structural motif]
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
46719511..46746450 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006723172.3 → XP_006723235.1 striatin-4 isoform X2
- UniProtKB/TrEMBL
-
Q59GV6
- Conserved Domains (4) summary
-
- COG2319
Location:431 → 761
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:445 → 767
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam08232
Location:64 → 204
- Striatin; Striatin family
- sd00039
Location:458 → 504
- 7WD40; WD40 repeat [structural motif]
-
XM_006723171.3 → XP_006723234.1 striatin-4 isoform X1
- UniProtKB/TrEMBL
-
Q59GV6
- Conserved Domains (4) summary
-
- COG2319
Location:438 → 768
- WD40; WD40 repeat [General function prediction only]
- cd00200
Location:452 → 774
- WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
- pfam08232
Location:64 → 204
- Striatin; Striatin family
- sd00039
Location:465 → 511
- 7WD40; WD40 repeat [structural motif]
-
XM_047438714.1 → XP_047294670.1 striatin-4 isoform X5
- UniProtKB/TrEMBL
- B4DMU7, F5GYK2
- Related
- ENSP00000440901.1, ENST00000539396.5
-
XM_047438713.1 → XP_047294669.1 striatin-4 isoform X4
- UniProtKB/TrEMBL
-
B4DMU7
-
XM_047438712.1 → XP_047294668.1 striatin-4 isoform X3
- UniProtKB/TrEMBL
-
B4DMU7
-
XM_047438715.1 → XP_047294671.1 striatin-4 isoform X6
- UniProtKB/TrEMBL
-
B4DMU7
-
XM_011526878.2 → XP_011525180.1 striatin-4 isoform X7
- Conserved Domains (1) summary
-
- pfam08232
Location:64 → 204
- Striatin; Striatin family
-
XM_017026719.2 → XP_016882208.1 striatin-4 isoform X8
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
49545101..49572026 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054320764.1 → XP_054176739.1 striatin-4 isoform X2
- UniProtKB/TrEMBL
-
Q59GV6
-
XM_054320763.1 → XP_054176738.1 striatin-4 isoform X1
- UniProtKB/TrEMBL
-
Q59GV6
-
XM_054320767.1 → XP_054176742.1 striatin-4 isoform X5
- UniProtKB/TrEMBL
- B4DMU7, F5GYK2
-
XM_054320766.1 → XP_054176741.1 striatin-4 isoform X4
- UniProtKB/TrEMBL
-
B4DMU7
-
XM_054320765.1 → XP_054176740.1 striatin-4 isoform X3
- UniProtKB/TrEMBL
-
B4DMU7
-
XM_054320768.1 → XP_054176743.1 striatin-4 isoform X6
- UniProtKB/TrEMBL
-
B4DMU7
-
XM_054320769.1 → XP_054176744.1 striatin-4 isoform X7
-
XM_054320770.1 → XP_054176745.1 striatin-4 isoform X8