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    LOC4329253 auxin-responsive protein SAUR50 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4329253, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4329253
    Gene description
    auxin-responsive protein SAUR50
    Locus tag
    OSNPB_020445600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1116_C12.20
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    Genomic context

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    See LOC4329253 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (14812718..14813487)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (14355247..14356191)

    Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene non-specific lipid-transfer protein 4 Neighboring gene uncharacterized LOC136355226 Neighboring gene uncharacterized LOC136355227 Neighboring gene uncharacterized LOC136355228

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in response to auxin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    auxin-responsive protein SAUR50
    Names
    Os02g0445600

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

      Range
      14812718..14813487
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015769468.3 → XP_015624954.1  auxin-responsive protein SAUR50

      UniProtKB/TrEMBL
      A0A0P0VIK8, A2X4C5, A3A6D7
      Conserved Domains (1) summary
      cl23790
      Location:1 → 95
      Auxin_inducible; Auxin responsive protein
    Nucleotide Protein
    Heading Accession and Version

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