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    LOC4345525 uncharacterized LOC4345525 [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4345525, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4345525
    Gene description
    uncharacterized LOC4345525
    Locus tag
    OSNPB_080404500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    OJ1118_A03.27
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    Genomic context

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    See LOC4345525 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 8 NC_089042.1 (19461137..19462321)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 8 NC_029263.1 (19324863..19326240)

    Chromosome 8 - NC_089042.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4345523 Neighboring gene FACT complex subunit SPT16-like Neighboring gene protein VACUOLELESS GAMETOPHYTES Neighboring gene heavy metal-associated isoprenylated plant protein 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC4345525
    Names
    Os08g0404500
    P0685B10.17

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089042.1 Reference ASM3414082v1 Primary Assembly

      Range
      19461137..19462321
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015794020.3 → XP_015649506.1  uncharacterized protein LOC4345525

      UniProtKB/TrEMBL
      A2YV26, Q6ZBD8, Q6ZKN9
      Conserved Domains (1) summary
      pfam03107
      Location:18 → 60
      C1_2; C1 domain
    Nucleotide Protein
    Heading Accession and Version

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