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    LOC4324705 chlorophyll a-b binding protein 2, chloroplastic-like [ Oryza sativa Japonica Group (Japanese rice) ]

    Gene ID: 4324705, updated on 12-Jul-2024

    Summary

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    Gene symbol
    LOC4324705
    Gene description
    chlorophyll a-b binding protein 2, chloroplastic-like
    Locus tag
    OSNPB_010720500
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryza sativa Japonica Group
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
    Also known as
    P0690B02.7
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    Genomic context

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    See LOC4324705 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (30627934..30629018)
    102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (30030985..30032087)

    Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107276869 Neighboring gene inorganic pyrophosphatase 1 Neighboring gene probable starch synthase 4, chloroplastic/amyloplastic Neighboring gene probable serine acetyltransferase 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in photosynthesis, light harvesting in photosystem I IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to light stimulus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast envelope IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in chloroplast thylakoid membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plastoglobule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    chlorophyll a-b binding protein 2, chloroplastic-like
    Names
    Os01g0720500
    chlorophyll a-b binding protein of LHCII type 1
    putative chlorophyll a/b-binding protein 3C

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3414082v1 Primary Assembly

    Genomic

    1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

      Range
      30627934..30629018
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015792803.3 → XP_015648289.1  chlorophyll a-b binding protein 2, chloroplastic-like

      UniProtKB/TrEMBL
      A0A8J8YC10, A2WUJ5, A2ZXB4, O24226, Q0JJS4, Q8W0E6
      Conserved Domains (1) summary
      PLN00025
      Location:5 → 265
      PLN00025; photosystem II light harvesting chlorophyll a/b binding protein; Provisional
    Nucleotide Protein
    Heading Accession and Version

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