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    GAP43 growth associated protein 43 [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 711260, updated on 17-Aug-2024

    Summary

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    Official Symbol
    GAP43provided by VGNC
    Official Full Name
    growth associated protein 43provided by VGNC
    Primary source
    VGNC:VGNC:72880
    Locus tag
    EGK_11312
    See related
    Ensembl:ENSMMUG00000012578
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See GAP43 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 2 NC_041755.1 (160545841..160643851, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 2 NC_027894.1 (36692617..36793204)

    Chromosome 2 - NC_041755.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106996788 Neighboring gene limbic system associated membrane protein Neighboring gene uncharacterized LOC114676161 Neighboring gene eukaryotic translation initiation factor 4E type 2 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Increased expression of the growth-associated protein 43 gene in the sensorimotor cortex of the macaque monkey after lesioning the lateral corticospinal tract. Higo N, et al. J Comp Neurol, 2009 Oct 20. PMID 19672995
    2. Genome sequencing and comparison of two nonhuman primate animal models, the cynomolgus and Chinese rhesus macaques. Yan G, et al. Nat Biotechnol, 2011 Oct 16. PMID 22002653
    3. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calmodulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables lysophosphatidic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylinositol phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in axon choice point recognition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in axon regeneration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of growth IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tissue regeneration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neuromodulin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041755.1 Reference Mmul_10 Primary Assembly

      Range
      160545841..160643851 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001107824.4 → XP_001107824.1  neuromodulin isoform X2

      See identical proteins and their annotated locations for XP_001107824.1

      UniProtKB/TrEMBL
      F7FEE8, H9EVC8
      Related
      ENSMMUP00000016512.2, ENSMMUT00000017632.4
      Conserved Domains (2) summary
      smart00015
      Location:30 → 52
      IQ; Calmodulin-binding motif
      pfam06614
      Location:67 → 238
      Neuromodulin; Neuromodulin

    2. XM_028843446.1 → XP_028699279.1  neuromodulin isoform X1

      UniProtKB/TrEMBL
      H9EVC8
      Conserved Domains (2) summary
      smart00015
      Location:45 → 67
      IQ; Calmodulin-binding motif
      pfam06614
      Location:82 → 253
      Neuromodulin
    Nucleotide Protein
    Heading Accession and Version

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