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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001278549.2 → NP_001265478.1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial isoform 1 precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longer isoform (1).
- Source sequence(s)
-
AC018712, AK304388, BQ023252, DC322401
- Consensus CDS
-
CCDS63059.1
- UniProtKB/TrEMBL
-
Q53R49
- Related
- ENSP00000376352.2, ENST00000392571.6
- Conserved Domains (3) summary
-
- smart00387
Location:290 → 410
- HATPase_c; Histidine kinase-like ATPases
- COG0642
Location:244 → 418
- BaeS; Signal transduction histidine kinase [Signal transduction mechanisms]
- pfam10436
Location:56 → 240
- BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
-
NM_002610.5 → NP_002601.1 [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial isoform 2 precursor
See identical proteins and their annotated locations for NP_002601.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) lacks an in-frame exon in the coding region, compared to variant 1. The resulting isoform (2) lacks an internal segment, compared to isoform 1.
- Source sequence(s)
-
AC018712, AK312700, BQ023252
- Consensus CDS
-
CCDS2250.1
- UniProtKB/Swiss-Prot
- B2R6T1, B7Z937, D3DPD8, E9PD65, Q15118, Q308M4
- UniProtKB/TrEMBL
-
Q53R49
- Related
- ENSP00000282077.3, ENST00000282077.8
- Conserved Domains (2) summary
-
- smart00387
Location:270 → 390
- HATPase_c; Histidine kinase-like ATPases
- pfam10436
Location:56 → 220
- BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
RNA
-
NR_103729.2 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an internal exon and has a split 3' exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC018712, BC039158, BQ023252, DC322401
-
NR_103731.1 RNA Sequence
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains alternate 5' and 3' sequences and lacks an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC093818, AK302321, BX485353
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000002.12 Reference GRCh38.p14 Primary Assembly
- Range
-
172555373..172724312
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011511343.3 → XP_011509645.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X1
See identical proteins and their annotated locations for XP_011509645.1
- UniProtKB/TrEMBL
-
Q53R49
- Conserved Domains (3) summary
-
- smart00387
Location:214 → 334
- HATPase_c; Histidine kinase-like ATPases
- COG0642
Location:168 → 342
- BaeS; Signal transduction histidine kinase [Signal transduction mechanisms]
- pfam10436
Location:2 → 164
- BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
-
XM_011511345.4 → XP_011509647.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X2
See identical proteins and their annotated locations for XP_011509647.1
- UniProtKB/TrEMBL
- B7Z7N6, Q53R49
- Conserved Domains (3) summary
-
- smart00387
Location:194 → 314
- HATPase_c; Histidine kinase-like ATPases
- COG0642
Location:148 → 322
- BaeS; Signal transduction histidine kinase [Signal transduction mechanisms]
- pfam10436
Location:2 → 144
- BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
-
XM_047444737.1 → XP_047300693.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X3
-
XM_047444738.1 → XP_047300694.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X4
-
XM_006712594.3 → XP_006712657.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X6
- Conserved Domains (1) summary
-
- pfam10436
Location:56 → 240
- BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
-
XM_047444740.1 → XP_047300696.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X7
-
XM_011511344.3 → XP_011509646.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X1
See identical proteins and their annotated locations for XP_011509646.1
- UniProtKB/TrEMBL
-
Q53R49
- Conserved Domains (3) summary
-
- smart00387
Location:214 → 334
- HATPase_c; Histidine kinase-like ATPases
- COG0642
Location:168 → 342
- BaeS; Signal transduction histidine kinase [Signal transduction mechanisms]
- pfam10436
Location:2 → 164
- BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
-
XM_047444736.1 → XP_047300692.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X2
- UniProtKB/TrEMBL
-
B7Z7N6
-
XM_011511347.3 → XP_011509649.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X1
See identical proteins and their annotated locations for XP_011509649.1
- UniProtKB/TrEMBL
-
Q53R49
- Conserved Domains (3) summary
-
- smart00387
Location:214 → 334
- HATPase_c; Histidine kinase-like ATPases
- COG0642
Location:168 → 342
- BaeS; Signal transduction histidine kinase [Signal transduction mechanisms]
- pfam10436
Location:2 → 164
- BCDHK_Adom3; Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase
-
XM_047444739.1 → XP_047300695.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X5
- UniProtKB/TrEMBL
-
B7Z207
RNA
-
XR_007076395.1 RNA Sequence
-
XR_007076402.1 RNA Sequence
-
XR_007076394.1 RNA Sequence
-
XR_922944.3 RNA Sequence
-
XR_001738772.3 RNA Sequence
-
XR_001738774.3 RNA Sequence
-
XR_001738771.2 RNA Sequence
-
XR_007076391.1 RNA Sequence
-
XR_007076393.1 RNA Sequence
-
XR_007076392.1 RNA Sequence
-
XR_922942.2 RNA Sequence
-
XR_922943.2 RNA Sequence
-
XR_007076398.1 RNA Sequence
-
XR_007076396.1 RNA Sequence
-
XR_007076401.1 RNA Sequence
-
XR_007076403.1 RNA Sequence
-
XR_007076399.1 RNA Sequence
-
XR_007076400.1 RNA Sequence
-
XR_007076397.1 RNA Sequence
-
XR_922945.1 RNA Sequence
-
XR_001738775.3 RNA Sequence
-
XR_427093.4 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060926.1 Alternate T2T-CHM13v2.0
- Range
-
173041625..173210788
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054342534.1 → XP_054198509.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X1
-
XM_054342536.1 → XP_054198511.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X2
- UniProtKB/TrEMBL
-
B7Z7N6
-
XM_054342538.1 → XP_054198513.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X3
-
XM_054342539.1 → XP_054198514.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X4
-
XM_054342541.1 → XP_054198516.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X6
-
XM_054342542.1 → XP_054198517.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X7
-
XM_054342533.1 → XP_054198508.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X1
-
XM_054342537.1 → XP_054198512.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X2
- UniProtKB/TrEMBL
-
B7Z7N6
-
XM_054342535.1 → XP_054198510.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X1
-
XM_054342540.1 → XP_054198515.1 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial isoform X5
- UniProtKB/TrEMBL
-
B7Z207
RNA
-
XR_008486404.1 RNA Sequence
-
XR_008486405.1 RNA Sequence
-
XR_008486414.1 RNA Sequence
-
XR_008486401.1 RNA Sequence
-
XR_008486411.1 RNA Sequence
-
XR_008486396.1 RNA Sequence
-
XR_008486399.1 RNA Sequence
-
XR_008486403.1 RNA Sequence
-
XR_008486402.1 RNA Sequence
-
XR_008486397.1 RNA Sequence
-
XR_008486398.1 RNA Sequence
-
XR_008486409.1 RNA Sequence
-
XR_008486407.1 RNA Sequence
-
XR_008486413.1 RNA Sequence
-
XR_008486415.1 RNA Sequence
-
XR_008486410.1 RNA Sequence
-
XR_008486412.1 RNA Sequence
-
XR_008486408.1 RNA Sequence
-
XR_008486400.1 RNA Sequence
-
XR_008486406.1 RNA Sequence
-
XR_008486395.1 RNA Sequence