U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Nucleotide

    • Showing Current items.

    TLR7 toll like receptor 7 [ Apteryx mantelli mantelli ]

    Gene ID: 106490995, updated on 13-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TLR7
    Gene description
    toll like receptor 7
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Apteryx mantelli mantelli (sub-species: mantelli)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Palaeognathae; Apterygiformes; Apterygidae; Apteryx; Apteryx mantelli
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TLR7 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    100 current AptMant0 (GCF_001039765.1) Unplaced Scaffold NW_013987740.1 (8821981..8830082)

    NW_013987740.1Genomic Context describing neighboring genes Neighboring gene FERM and PDZ domain containing 4 Neighboring gene phosphoribosyl pyrophosphate synthetase 2 Neighboring gene thymosin beta 4 X-linked Neighboring gene uncharacterized LOC106491010

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_013987740.1 Unplaced Scaffold Reference AptMant0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables pattern recognition receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical NF-kappaB signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in defense response to virus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of interleukin-6 production IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in toll-like receptor 7 signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in toll-like receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    LOW QUALITY PROTEIN: toll-like receptor 7

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Apteryx australis mantelli Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference AptMant0

    Genomic

    1. NW_013987740.1 Reference AptMant0

      Range
      8821981..8830082
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013950523.1 → XP_013805977.1  LOW QUALITY PROTEIN: toll-like receptor 7

      UniProtKB/TrEMBL
      A0A8B7J4B0
      Conserved Domains (6) summary
      smart00013
      Location:95 → 116
      LRRNT; Leucine rich repeat N-terminal domain
      smart00255
      Location:939 → 1082
      TIR; Toll - interleukin 1 - resistance
      cd00116
      Location:544 → 808
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      sd00033
      Location:545 → 567
      LRR_RI; leucine-rich repeat [structural motif]
      pfam13855
      Location:699 → 760
      LRR_8; Leucine rich repeat
      cl15307
      Location:832 → 878
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.