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    CD58 CD58 molecule [ Anas platyrhynchos (mallard) ]

    Gene ID: 101801659, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CD58
    Gene description
    CD58 molecule
    Locus tag
    Anapl_14072
    See related
    EnsemblRapid:ENSAPLG00030030670
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Anas platyrhynchos
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae; Anatinae; Anas
    Orthologs
    human all
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    Genomic context

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    See CD58 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    104 current ZJU1.0 (GCF_015476345.1) 1 NC_051772.1 (84731851..84751473)
    103 previous assembly IASCAAS_PekingDuck_PBH1.5 (GCF_003850225.1) 1 NC_040046.1 (119307402..119325929, complement)

    Chromosome 1 - NC_051772.1Genomic Context describing neighboring genes Neighboring gene popeye domain containing 2 Neighboring gene phospholipase A1 member A Neighboring gene ATPase Na+/K+ transporting subunit alpha 1 Neighboring gene uncharacterized LOC119717648

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    lymphocyte function-associated antigen 3
    Names
    CD58 antigen

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001310818.1 → NP_001297747.1  lymphocyte function-associated antigen 3

      See identical proteins and their annotated locations for NP_001297747.1

      Status: PROVISIONAL

      Source sequence(s)
      AY032731
      UniProtKB/TrEMBL
      A0A8B9SPS3, Q90ZL5
      Related
      ENSAPLP00030046028.1, ENSAPLT00030079980.1
      Conserved Domains (1) summary
      cd05741
      Location:33 → 119
      Ig_CEACAM_D1_like; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM) and similar proteins

    RefSeqs of Annotated Genomes: Anas platyrhynchos Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ZJU1.0 Primary Assembly

    Genomic

    1. NC_051772.1 Reference ZJU1.0 Primary Assembly

      Range
      84731851..84751473
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027444566.2 → XP_027300367.2  lymphocyte function-associated antigen 3 isoform X2

      UniProtKB/TrEMBL
      A0A8B9SPS3
      Conserved Domains (2) summary
      pfam13895
      Location:135 → 192
      Ig_2; Immunoglobulin domain
      cd05775
      Location:24 → 120
      IgV_CD2_like_N; N-terminal immunoglobulin (Ig)-like domain of T-cell surface antigen CD2, and similar domains

    2. XM_027444000.2 → XP_027299801.2  lymphocyte function-associated antigen 3 isoform X1

      UniProtKB/TrEMBL
      A0A8B9SPS3
      Conserved Domains (2) summary
      pfam13895
      Location:135 → 192
      Ig_2; Immunoglobulin domain
      cd05775
      Location:24 → 120
      IgV_CD2_like_N; N-terminal immunoglobulin (Ig)-like domain of T-cell surface antigen CD2, and similar domains
    Nucleotide Protein
    Heading Accession and Version

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