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Status
Public on Feb 24, 2010
Title
Agilent-021113 Tobacco Gene Expression Microarray (Feature Number version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Nicotiana tabacum Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Description
Arrays of this design have barcodes that begin with 16021113 or 2521113.
Submission date
Feb 24, 2010
Last update date
Nov 18, 2015
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (162)
GSM515406 , GSM515407 , GSM515408 , GSM515409 , GSM515410 , GSM515411
GSM515412 ,
GSM515413 ,
GSM856059 ,
GSM856060 ,
GSM856061 ,
GSM856062 ,
GSM856063 ,
GSM856064 ,
GSM856065 ,
GSM856066 ,
GSM856067 ,
GSM856068 ,
GSM856069 ,
GSM856070 ,
GSM856071 ,
GSM856072 ,
GSM856073 ,
GSM856074 ,
GSM856075 ,
GSM856076 ,
GSM879258 ,
GSM879259 ,
GSM879260 ,
GSM879261 ,
GSM1051130 ,
GSM1051131 ,
GSM1051132 ,
GSM1051133 ,
GSM1051134 ,
GSM1051135 ,
GSM1051136 ,
GSM1051137 ,
GSM1146169 ,
GSM1146170 ,
GSM1146171 ,
GSM1146172 ,
GSM1146173 ,
GSM1146174 ,
GSM1146175 ,
GSM1146176 ,
GSM1146177 ,
GSM1146178 ,
GSM1146179 ,
GSM1146180 ,
GSM1149052 ,
GSM1149053 ,
GSM1149054 ,
GSM1149055 ,
GSM1149056 ,
GSM1149057 ,
GSM1149058 ,
GSM1149059 ,
GSM1149060 ,
GSM1149061 ,
GSM1149062 ,
GSM1149063 ,
GSM1525599 ,
GSM1525600 ,
GSM1525601 ,
GSM1525602 ,
GSM1525603 ,
GSM1525604 ,
GSM2433206 ,
GSM2433207 ,
GSM2433208 ,
GSM2433209 ,
GSM2433210 ,
GSM2433211 ,
GSM2433212 ,
GSM2433213 ,
GSM2653917 ,
GSM2653918 ,
GSM2653919 ,
GSM2653920 ,
GSM2653921 ,
GSM2653922 ,
GSM2653923 ,
GSM2653924 ,
GSM2653925 ,
GSM2653926 ,
GSM2653927 ,
GSM2653928 ,
GSM2653929 ,
GSM2653930 ,
GSM2653931 ,
GSM2653932 ,
GSM2653933 ,
GSM2653934 ,
GSM2653935 ,
GSM2653936 ,
GSM2653937 ,
GSM2653938 ,
GSM2653939 ,
GSM2653940 ,
GSM2653941 ,
GSM2653942 ,
GSM3150512 ,
GSM3150513 ,
GSM3150514 ,
GSM3150515 ,
GSM3150516 ,
GSM3150517 ,
GSM3150518 ,
GSM3150519 ,
GSM3150520 ,
GSM3150521 ,
GSM3150522 ,
GSM3150523 ,
GSM3150524 ,
GSM3150525 ,
GSM3150526 ,
GSM3150527 ,
GSM3150528 ,
GSM3150529 ,
GSM3150530 ,
GSM3150531 ,
GSM3150532 ,
GSM3150533 ,
GSM3150534 ,
GSM3150535 ,
GSM3150536 ,
GSM3150537 ,
GSM3150538 ,
GSM3150539 ,
GSM3150540 ,
GSM3150541 ,
GSM3150542 ,
GSM3150543 ,
GSM3150544 ,
GSM3150545 ,
GSM3150546 ,
GSM3150547 ,
GSM3150548 ,
GSM3150549 ,
GSM3150550 ,
GSM3150551 ,
GSM3150552 ,
GSM3150553 ,
GSM3150554 ,
GSM3150555 ,
GSM3150556 ,
GSM3150557 ,
GSM3150558 ,
GSM3150559 ,
GSM3150560 ,
GSM3150561 ,
GSM3150562 ,
GSM3150563 ,
GSM3914416 ,
GSM5066729 ,
GSM5066730 ,
GSM5066731 ,
GSM6215343 ,
GSM6215344 ,
GSM6215345 ,
GSM6215346 Series (12)
GSE20520 Gene expression profiles following GR24, smoke water and KAR1 treatments in Nicotiana benthamiana seedlings
GSE34841 Comparative transcriptomic responses to compatible and incompatible plant-virus interactions that lead to cell death
GSE36008 Transcriptome of tobacco leaves in different environmental conditions
GSE42833 Analysis of transcriptional response to mutated Potyvirus Potato virus A that induces necrotic symptoms.
GSE47180 Profiling of genes related to cross protection and competition for NbTOM1 by HLSV and TMV
GSE47410 Quantitative transcriptional changes associated with chlorosis severity in mosaic leaves of tobacco plants infected with the Cucumber mosaic virus
GSE62349 Transcriptome profiling of male gametophyte development in Nicotiana tabacum
GSE92596 Chloroplast redox status modulates genome-wide plant responses during plant-microbe interaction
GSE99838 Viral fitness correlates with the magnitude and direction of the perturbation induced in the host's transcriptome: the tobacco etch potyvirus - tobacco case study.
GSE114806 Tobacco pollen sequestrome dynamics
GSE133681 Search for genes regulated by WIPK and SIPK in wounded tobacco leaves
GSE205597 Genes regulated by WIPK and SIPK in wounded tobacco leaves
Relations Alternative to
GPL21056 Alternative to
GPL21158 (GeneName version)
Data table header descriptions ID Agilent feature number
COL Column
ROW Row
NAME NAME
SPOT_ID Spot identifier
CONTROL_TYPE Control type
GB_LIST GenBank Accession number
LOCUSLINK_ID LocuslinkID
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
UNIGENE_ID UnigeneID
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
DESCRIPTION Description
GO_ID GoIDs
SEQUENCE Sequence
Data table ID COL ROW NAME SPOT_ID CONTROL_TYPE GB_LIST LOCUSLINK_ID GENE_SYMBOL GENE_NAME UNIGENE_ID ACCESSION_STRING CHROMOSOMAL_LOCATION DESCRIPTION GO_ID SEQUENCE 1
266
170
GE_BrightCorner
control
pos
2
266
168
DarkCorner
control
pos
3
266
166
DarkCorner
control
pos
4
266
164
DarkCorner
control
pos
5
266
162
DarkCorner
control
pos
6
266
160
DarkCorner
control
pos
7
266
158
DarkCorner
control
pos
8
266
156
DarkCorner
control
pos
9
266
154
DarkCorner
control
pos
10
266
152
DarkCorner
control
pos
11
266
150
DarkCorner
control
pos
12
266
148
A_95_P225077
FALSE
EB681313 Nta.355
gb|EB681313|ta|TA20660_4097|tc|TC71848
unmapped
KL4B.113B11F.060131T7 KL4B Nicotiana tabacum cDNA clone KL4B.113B11, mRNA sequence [EB681313]
TTTTGGATATGTTGCGACATTTGTGAAATGTGGTTTCATGGCAAGTGTGTGAAGATCACC
13
266
146
A_95_P129702
FALSE
EB429667 Nta.12046
ta|EB429667
unmapped
TTGCCTCTGGAACTCTATAAAGTTGATAGTATCAATAGCATGTGATAAGCATTTGAATGC
14
266
144
A_95_P270641
FALSE
FG177673 Nta.12169
gb|FG177673
unmapped
AGN_RNC118xl09r1.ab1 AGN_RNC Nicotiana tabacum cDNA 3', mRNA sequence [FG177673]
AGGTCTTAAAAATCTTCTCTCAAAAACAAGACCCGAGATCAGATCTGACTGCAGACGCCC
15
266
142
A_95_P026506
ta|TA19895_4097|tc|TC68712
FALSE
ta|TA19895_4097|tc|TC68712
unmapped
Rep: Chromosome undetermined scaffold_30, whole genome shotgun sequence - Vitis vinifera (Grape), partial (13%) [TC68712]
GAGATTATAGATCAAGGTCACCGGTAAGATCCCGTCGTTATTCAGGCTATGAAGATGAAG
16
266
140
A_95_P313938
FALSE
FG162518 Nta.20950
gb|FG162518
unmapped
AGN_RNC016xe22r1.ab1 AGN_RNC Nicotiana tabacum cDNA 3', mRNA sequence [FG162518]
TTTCAGATAAAAGTTCTTTGTGTTCTCTCCGCGATGCTGAGCAACAGTGATGAGGTCCTG
17
266
138
A_95_P069260
FALSE
BP137335 ta|BP137335
unmapped
TCTTTAAGTCAACAAGGGGTGTGAAACAAGGGGATCCCCTATCTCCAGCATTGTTCATTC
18
266
136
A_95_P057946
FALSE
BP134345 ta|BP134345
unmapped
ACCCCTGGCTAAAAACTCACAATTCAAAACGTGAAAGCAAATATTCAACGTGAATGAGTG
19
266
134
A_95_P038216
FALSE
BP129210 ta|BP129210
unmapped
TGCGTTCTCATATCACATGCACTGACTGGGTCGTGTACCTCGTCAAGAAAACTCTTAAAG
20
266
132
A_95_P005006
FALSE
EH666078 Nta.2833
gb|EH666078
unmapped
29G06 Transformed tobacco Lambda Zap II library Nicotiana tabacum cDNA 5', mRNA sequence [EH666078]
ATCATCGCTAATATAGGTTCAAAATCTTTCTGTTCAGGCTTTAAACAACGCAACAGTTCC
45220 8986 Kbytes .Supplementary data files not provided
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