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Platform GPL10302 Query DataSets for GPL10302
Status Public on Apr 14, 2010
Title Agilent Xenopus laevis 22k AMADID-013665
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Xenopus laevis
Manufacturer Agilent Technologies Inc.
Manufacture protocol Please see manufacturer's web site
Support glass
 
Description This in situ synthesized 60-mer oligonucleotide contains 21495 spots and is designed from NCBI Unigene database (build 63/64) for Xenopus laevis. It is designed using Agilent e-Array.
 
Contributor(s) Das B, Technologies A
Submission date Apr 09, 2010
Last update date Apr 14, 2010
Contact name Biswajit Das
E-mail(s) dasbiswa@mail.nih.gov
Organization name National Institutes of Health/National Institute of Child Health and Human Development
Department Laboratory of Gene Regulation and Development
Lab Section on Molecular Morphogenesis
Street address 18 Library Drive, Building 18T, Room 106
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (17) GSM532348, GSM532349, GSM532350, GSM532351, GSM532352, GSM532353 
Series (3)
GSE21303 Studies on Xenopus laevis intestine reveal biological pathways underlying vertebrate gut adaptation from embryo to adult
GSE25734 Transcriptional targets of Xenopus EBF3 in the presence of Noggin : Untreated animal caps vs. Dexamethasone (DEX) treated animal caps
GSE27084 Transcriptional targets of Xenopus EBF3 in the absence of Noggin : Untreated animal caps vs. Dexamethasone (DEX) treated animal caps

Data table header descriptions
ID
GB_ACC GenBank Accession
GENE_SYMBOL Putative Gene Symbol
SEQUENCE Oligonucleotide Sequence
GENE_NAME Putative Gene Name
DESC Description

Data table
ID GB_ACC GENE_SYMBOL SEQUENCE GENE_NAME DESC
A_10_P000001 AB000406 ppp2r2b-A-prov TTCTTCCTCGGTTTAGAATAGATAAACTTGCTTCTTAAATTCCCAGTAATCTCTATTCCG phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform Xenopus laevis mRNA for protein phosphatase 2A regulatory subunit, complete cds [AB000406]
A_10_P000002 AB001073 sax GGTCTTGCATCCACGCCAAAGGCTGCTCGGACAATTTTGCAAATATTTTGGGTCTCTAAA activin type I receptor Xenopus laevis mRNA for activin type I receptor, complete cds [AB001073]
A_10_P000003 AB001469 xlimk1 TTGAACAACTTGAACAGAATTTCTGGGAAAACTACAGGAGGGGTGATAGCACACTTCACG xlimk1 protein Xenopus laevis mRNA for Xlimk1, complete cds [AB001469]
A_10_P000004 AB002629 LOC397698 GTGCCTTCATGTGTCTCACCCTGTGCGGAACTGCTGTGTCATTTGGACTATAATGTTTTT p100-NFkappaB2 Xenopus laevis mRNA for p100-NFkappaB2, complete cds [AB002629]
A_10_P000005 AB003358 lyn-A GGCCTGTTTACTGGCGTTGCTTGTGCAGAGCTGGTGTCATAATCTTGACATATGGAAATA v-yes-1 Yamaguchi sarcoma viral related oncogene homolog Xenopus laevis mRNA for Lyn protein tyrosine kinase, complete cds [AB003358]
A_10_P000006 AB004782 psma4-B CCACATAATGGTCTGCACGTGGCACTGACATATTCATTGTGTTTAGGATTGGCTCTACAA 20S proteasome alpha4 subunit Xenopus laevis mRNA for 20S proteasome alpha 4 subunit, complete cds [AB004782]
A_10_P000007 AB004793 SSRP1 CAGCACTCCAGCTAGCTCAGCTGAATCGGGTTCAGATTAATCAAGCCATCCCATAAAAAT DUF87 Xenopus laevis mRNA for DUF87, complete cds [AB004793]
A_10_P000008 AB004794 SUPT16H ATTGTTTTCCTCGCTGCTGCTCTAAACTCAAGATATGGCTTTTTGATGCTTTCCCCCCTC DUF140 Xenopus laevis mRNA for DUF140, complete cds [AB004794]
A_10_P000009 AB005292 zic3-A ACGTCATGCAATGCTGAAACTAATGACAATATTCTGATTCTGCTGTATTAATTGGTCATC Zic family member 3 heterotaxy 1 Xenopus laevis mRNA for Zic3 protein, complete cds [AB005292]
A_10_P000010 AB006906 VLDLR CCTTTTTTATAGAGGTATGCAGAGGGTTTACTCCCTATTAAAACCACTGGAGAATCTTTT vitellogenin receptor Xenopus laevis mRNA for vitellogenin receptor, complete cds [AB006906]
A_10_P000011 AB007035 FGFR3 TATTAATCAATTTCGAATGGTTCAAATTTAGGAGAGTTTTTAAAAATGGCGGCGACCACG FGF receptor 3 Xenopus laevis mRNA for FGF receptor 3, complete cds [AB007035]
A_10_P000012 AB007468 LOC397702 ATTTGATGTGATTGTCAGAACAATCAGAGTGCAAACATGCTCATCATGTATTTTCCATTC alpha-2,8-polysialyltransferase Xenopus laevis mRNA for alpha-2,8-polysialyltransferase, complete cds [AB007468]
A_10_P000013 AB008225 sglt-1-like-A-prov TGTACTTTCCAGTGCTGCTTTTGTTAAACTTGTACAACGGAGTCCCATCCCGGATATTAT Na -glucose cotransporter type 1 (SGLT-1)-like protein Xenopus laevis mRNA for Na -glucose cotransporter type 1 (SGLT-1)-like protein, complete cds [AB008225]
A_10_P000014 AB008773 PROX1 TAGAAAATTAACTGGATATTCTCCCTTGCCCAGATAACTGGGAGGGGAGTTCTTTTACAT Prox 1 Xenopus laevis Prox 1 mRNA, complete cds [AB008773]
A_10_P000015 AB009072 masp2-A ATGTGGCCTGAAACGTTGCCGTGATGCCCCTGTGAAGCACGAATAAAGGCATTTTAAATA mannose-binding protein-associated serine protease 2 Xenopus laevis mRNA for mannose-binding protein-associated serine protease 2, complete cds [AB009072]
A_10_P000016 AB009565 Zic2 GTGACATGTTTTAAAAGTAATGCATACAGACCTCCTAATAAAATGTGTTGAAACTGCGAC Zic2 protein Xenopus laevis mRNA for Zic2 protein, complete cds [AB009565]
A_10_P000017 AB012615 XFGF-20 CCACCAATACCCAAGTCATGTTATTGATGTGTATGGATGCCTTAAAGTTTTGCCCATTGA XFGF-20 protein Xenopus laevis mRNA for XFGF-20, complete cds [AB012615]
A_10_P000018 AB014091 LOC397792 TAGGCCTTTCCTGTTGACTATTTACGATATGGAGACAAAACACACCCTCTTTCTTGGAAG alpha-1-antiproteinase Xenopus laevis mRNA for alpha-1-antiproteinase, complete cds [AB014091]
A_10_P000020 AB014611 foxd3-A CTAAAAGCCAAGACTCTCAATGAACTTTTCTTGCTAAAACTGTACAGATCTGGAATGCAT forkhead box D3 Xenopus laevis mRNA for XFD-6, complete cds [AB014611]
A_10_P000021 AB015205 LOC397710 AGCGAAGGTGGTGATGGAGCAGTTGCTTACATTAAAATTTCTGGAGGTGCAACAGGGATT contactin A Xenopus laevis mRNA for contactin A, complete cds [AB015205]

Total number of rows: 21495

Table truncated, full table size 4223 Kbytes.




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