GEO help: Mouse over screen elements for information.
Status
Public on Nov 17, 2010
Title
NimbleGen Homo sapiens HG18 60mer expr (385k)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Homo sapiens Manufacturer
NimbleGen
Manufacture protocol
High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
Description
NimbleGen design HG18 60mer expr (DESIGN_ID: 4542). Expression design for human (hg18; NCBI Build 36). 8 60mer probes per gene. 47633 exemplar genes representing a total of 63780 transcripts/variants.
Submission date
Nov 17, 2010
Last update date
Nov 17, 2010
Organization
NimbleGen Systems, Inc.
E-mail(s)
geo@ncbi.nlm.nih.gov Phone
608-218-7600
URL
http://www.nimblegen.com/ Street address
504 S. Rosa Road
City
Madison
State/province
WI
ZIP/Postal code
53719
Country
USA
Samples (50)
GSM624307 , GSM624308 , GSM624309 , GSM624310 , GSM624311 , GSM624312
GSM624313 ,
GSM624314 ,
GSM624315 ,
GSM624316 ,
GSM624317 ,
GSM624318 ,
GSM649339 ,
GSM649340 ,
GSM649341 ,
GSM649342 ,
GSM649343 ,
GSM649344 ,
GSM649345 ,
GSM649346 ,
GSM649347 ,
GSM649348 ,
GSM649349 ,
GSM649350 ,
GSM679748 ,
GSM679749 ,
GSM822886 ,
GSM822887 ,
GSM822888 ,
GSM822889 ,
GSM822890 ,
GSM822891 ,
GSM940689 ,
GSM940690 ,
GSM940691 ,
GSM940692 ,
GSM940693 ,
GSM940694 ,
GSM1260322 ,
GSM1260323 ,
GSM1260324 ,
GSM1260325 ,
GSM1260326 ,
GSM1260327 ,
GSM1260328 ,
GSM1260329 ,
GSM1260330 ,
GSM1260331 ,
GSM1260332 ,
GSM1260333 Series (8)
GSE25434 Comparative gene expression analysis upon stimulation of the human BCR or an inducible LMP2A in EBV immortalized lymphoblastoid cell lines
GSE26454 Gene expression profiles of CARM1 overexpression in MCF7
GSE27518 LATE-REPLICATING HETEROCHROMATIN IS CHARACTERISED BY DECREASED CYTOSINE METHYLATION IN THE HUMAN GENOME (expression)
GSE27538 LATE-REPLICATING HETEROCHROMATIN IS CHARACTERISED BY DECREASED CYTOSINE METHYLATION IN THE HUMAN GENOME
GSE31939 VDR/RXR and TCF4/beta-Catenin Cistromes in Colonic Cells of Colorectal Tumor Origin: Impact on c-FOS and c-MYC Gene Expression
GSE38369 Lipocalin 2 (LCN2), the TNF-like receptor TWEAKR and its ligand TWEAK act downstream of NFAT1 to regulate breast cancer cell invasion
GSE52150 Analysis of RNA expression changes in normal human hematopoietic stem and progenitor cells
GSE52152 Analysis of RNA expression and DNA cytosine methylation in healthy human hematopoietic stem and progenitor cells
Data table header descriptions ID GB_ACC GenBank Accession number
BUILD FEAT_TYPE CHROMOSOME START STOP
Data table ID GB_ACC BUILD FEAT_TYPE CHROMOSOME START STOP AB000409
AB000409 HG18;NCBI Build 36
transcript
chr1
46795677
46842496
AB000461
AB000461 HG18;NCBI Build 36
transcript
chr4
2596956
2704077
AB000463
AB000463 HG18;NCBI Build 36
transcript
chr4
2790338
2805812
AB000781
AB000781 HG18;NCBI Build 36
transcript
chr10
134830875
134888424
AB001025
AB001025 HG18;NCBI Build 36
transcript
chr15
31390454
31945594
AB001328
AB001328 HG18;NCBI Build 36
transcript
chr13
98151943
98176822
AB002294
AB002294 HG18;NCBI Build 36
transcript
chr16
30994723
31002327
AB002308
AB002308 HG18;NCBI Build 36
transcript
chr9
138454379
138497328
AB002311
AB002311 HG18;NCBI Build 36
transcript
chr4
160408695
160500749
AB002313
AB002313 HG18;NCBI Build 36
transcript
chr22
49055536
49071150
AB002360
AB002360 HG18;NCBI Build 36
transcript
chr13
112670814
112800864
AB002372
AB002372 HG18;NCBI Build 36
transcript
chr20
1194998
1237969
AB002377
AB002377 HG18;NCBI Build 36
transcript
chr3
15683749
15875933
AB002381
AB002381 HG18;NCBI Build 36
transcript
chr10
76272621
76462056
AB002382
AB002382 HG18;NCBI Build 36
transcript
chr11
57236664
57342494
AB002384
AB002384 HG18;NCBI Build 36
transcript
chr6
24912491
25019174
AB003177
AB003177 HG18;NCBI Build 36
transcript
chr12
120811020
120838932
AB003333
AB003333 HG18;NCBI Build 36
transcript
chr13
30608764
30634032
AB004885
AB004885 HG18;NCBI Build 36
transcript
chr2
171556815
171725391
AB006589
AB006589 HG18;NCBI Build 36
transcript
chr14
63763182
63874567
47633 3410 Kbytes .Supplementary file Size Download File type/resource GPL11219_2006-08-03_HG18_60mer_expr.ndf.gz
23.6 Mb
(ftp) (http) NDF
GPL11219_2006-08-03_HG18_60mer_expr.ngd.gz
3.0 Mb
(ftp) (http) NGD
Less...
More...