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Platform GPL1237 Query DataSets for GPL1237
Status Public on Jul 01, 2004
Title Saccharomyces cerevisiae ncRNA array
Technology type spotted oligonucleotide
Distribution non-commercial
Organism Saccharomyces cerevisiae
 
Description oligonucleotide array on glass
array covering all known ncRNA in S. cerevisiae made by Agilent
contains 21939 oligonucleotides of average length 18.4, concatenated to 60
Keywords = oligonucleotide, yeast, Saccharomyces cerevisiae, ncRNA
 
Web link http://hugheslab.med.utoronto.ca
Contributor(s) Hughes TR
Submission date May 12, 2004
Last update date May 26, 2005
Contact name Timothy Richard Hughes
E-mail(s) t.hughes@utoronto.ca
Phone 416-946-8260
Fax 416-978-8528
URL http://hugheslab.med.utoronto.ca/
Organization name University of Toronto
Department Banting and Best Department of Medical Research
Street address 112 College St.
City Toronto
State/province ON
ZIP/Postal code M5G 1L6
Country Canada
 
Samples (1) GSM23104
Series (1)
GSE1404 Exploration of essential gene functions via titratable promoter alleles

Data table header descriptions
ID
ncRNA name of ncRNA
cover region the oligo covers
SEQUENCE sequence of the oligo

Data table
ID ncRNA cover SEQUENCE
1 AlaAGC 5_flank gggtctggcccccgggtctggcccccgggtctggcccccgggtctggcccccgggtctgg
2 AlaAGC 5_flank tttttaacagggtctggtttttaacagggtctggtttttaacagggtctggtttttaaca
3 AlaAGC 5_flank caaaggtttttaacagggcaaaggtttttaacagggcaaaggtttttaacagggcaaagg
4 AlaAGC 5_flank gccatcaaaggtttttaagccatcaaaggtttttaagccatcaaaggtttttaagccatc
5 AlaAGC 5_flank catagccatcaaaggttcatagccatcaaaggttcatagccatcaaaggttcatagccat
6 AlaAGC 5_flank tattattacatagccatcaatattattacatagccatcaatattattacatagccatcaa
7 AlaAGC 5_flank tttactattattacatagcctttactattattacatagcctttactattattacatagcc
8 AlaAGC 5_flank cacttaatttactattattacacacttaatttactattattacacacttaatttactatt
9 AlaAGC 5_flank gtttgcacttaatttactattagtttgcacttaatttactattagtttgcacttaattta
10 AlaAGC 5_flank catgtttgcacttaatttaccatgtttgcacttaatttaccatgtttgcacttaatttac
11 AlaAGC 5_flank cttacatgtttgcacttaacttacatgtttgcacttaacttacatgtttgcacttaactt
12 AlaAGC 5_flank ctttcttacatgtttgcactttcttacatgtttgcactttcttacatgtttgcactttct
13 AlaAGC 5_flank gagaatctttcttacatgtgagaatctttcttacatgtgagaatctttcttacatgtgag
14 AlaAGC 5_flank taccgagaatctttcttataccgagaatctttcttataccgagaatctttcttataccga
15 AlaAGC 5_flank tcgttaccgagaatctttcgttaccgagaatctttcgttaccgagaatctttcgttaccg
16 AlaAGC 5_flank tggtcgttaccgagatggtcgttaccgagatggtcgttaccgagatggtcgttaccgaga
17 AlaAGC 5_flank tatttgtatggtcgttactatttgtatggtcgttactatttgtatggtcgttactatttg
18 AlaAGC 5_flank/tRNA cccaatatttgtatggtccccaatatttgtatggtccccaatatttgtatggtccccaat
19 AlaAGC 5_flank/tRNA cacgcccaatatttgtacacgcccaatatttgtacacgcccaatatttgtacacgcccaa
20 AlaAGC 5_flank/tRNA ccacacgcccaatatccacacgcccaatatccacacgcccaatatccacacgcccaatat

Total number of rows: 21939

Table truncated, full table size 1888 Kbytes.




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Supplementary data files not provided

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