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Platform GPL16704 Query DataSets for GPL16704
Status Public on Mar 29, 2013
Title HMS/MLB_Cbf1Tye7_44k_validation
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Saccharomyces cerevisiae
Manufacturer Agilent Technologies
Manufacture protocol In situ oligosynthesized array with proprietary synthetic sequences that target Cbf1 and Tye7 putative binding sites in genomic context, with 0 to 4 mutations.
 
 
Submission date Feb 20, 2013
Last update date Mar 29, 2013
Contact name Raluca Gordan
E-mail(s) raluca.gordan@duke.edu
Organization name Duke University
Department Center for Genomic and Computational Biology
Street address 101 Science Dr, CIEMAS 2179
City Durham
State/province NC
ZIP/Postal code 27708
Country USA
 
Samples (2) GSM1085344, GSM1085345
Series (2)
GSE44437 Genomic regions flanking E-box sites influence DNA binding specificity of bHLH transcription factors through DNA shape (validation)
GSE44604 Genomic regions flanking E-box sites influence DNA binding specificity of bHLH transcription factors through DNA shape

Data table header descriptions
ID Probe name
Name
SEQUENCE Probe sequence
SPOT_ID

Data table
ID Name SEQUENCE SPOT_ID
1 cbf_Fl1_001_764 CGTGTATAAAAACACGTGACTATCTAGTAC cbf_Fl1_001_764
2 cbf_Fl1_002_764 CGTGTATACATTCACGTGTTTTTCTAGTAC cbf_Fl1_002_764
3 cbf_Fl1_003_764 CGTGTATAAAAACACGTGTTTTTCTAGTAC cbf_Fl1_003_764
4 cbf_Fl1_004_764 CGTGTATAAAACCACGTGACTATCTAGTAC cbf_Fl1_004_764
5 cbf_Fl1_005_764 CGTGTATACATTCACGTGTTTGTCTAGTAC cbf_Fl1_005_764
6 cbf_Fl1_006_764 CGTGTATAAAACCACGTGTTTGTCTAGTAC cbf_Fl1_006_764
7 cbf_Fl1_007_764 CGTGTATAAAAGCACGTGACTATCTAGTAC cbf_Fl1_007_764
8 cbf_Fl1_008_764 CGTGTATACATTCACGTGTTTCTCTAGTAC cbf_Fl1_008_764
9 cbf_Fl1_009_764 CGTGTATAAAAGCACGTGTTTCTCTAGTAC cbf_Fl1_009_764
10 cbf_Fl1_010_764 CGTGTATAAAATCACGTGACTATCTAGTAC cbf_Fl1_010_764
11 cbf_Fl1_011_764 CGTGTATACATTCACGTGTTTATCTAGTAC cbf_Fl1_011_764
12 cbf_Fl1_012_764 CGTGTATAAAATCACGTGTTTATCTAGTAC cbf_Fl1_012_764
13 cbf_Fl1_013_764 CGTGTATAAACACACGTGACTATCTAGTAC cbf_Fl1_013_764
14 cbf_Fl1_014_764 CGTGTATACATTCACGTGTTGTTCTAGTAC cbf_Fl1_014_764
15 cbf_Fl1_015_764 CGTGTATAAACACACGTGTTGTTCTAGTAC cbf_Fl1_015_764
16 cbf_Fl1_016_764 CGTGTATAAACCCACGTGACTATCTAGTAC cbf_Fl1_016_764
17 cbf_Fl1_017_764 CGTGTATACATTCACGTGTTGGTCTAGTAC cbf_Fl1_017_764
18 cbf_Fl1_018_764 CGTGTATAAACCCACGTGTTGGTCTAGTAC cbf_Fl1_018_764
19 cbf_Fl1_019_764 CGTGTATAAACGCACGTGACTATCTAGTAC cbf_Fl1_019_764
20 cbf_Fl1_020_764 CGTGTATACATTCACGTGTTGCTCTAGTAC cbf_Fl1_020_764

Total number of rows: 7142

Table truncated, full table size 473 Kbytes.




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