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Status
Public on Mar 29, 2013
Title
[ZebGene-1_0-st] Zebrafish Gene 1.0 ST Array [transcript (gene) version]
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Danio rerio
Manufacturer
Affymetrix
Manufacture protocol
See manufacturer's web site
Description
Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Jan 29, 2013: annotation table updated with netaffx build 33
Web link
http://www.affymetrix.com/support/technical/byproduct.affx?product=modelorg_1_1_array http://www.affymetrix.com/support/technical/libraryfilesmain.affx
Submission date
Mar 29, 2013
Last update date
May 07, 2013
Organization
Affymetrix, Inc.
E-mail(s)
geo@ncbi.nlm.nih.gov, support@affymetrix.com
Phone
888-362-2447
URL
http://www.affymetrix.com/index.affx
Street address
City
Santa Clara
State/province
CA
ZIP/Postal code
95051
Country
USA
Samples (400)
GSM1347323 , GSM1347324 , GSM1347325 , GSM1347326 , GSM1347327 , GSM1347328
GSM1347329 ,
GSM1347330 ,
GSM1347331 ,
GSM1347332 ,
GSM1347333 ,
GSM1347334 ,
GSM1347335 ,
GSM1347336 ,
GSM1347337 ,
GSM1347338 ,
GSM1347339 ,
GSM1347340 ,
GSM1347341 ,
GSM1347342 ,
GSM1347343 ,
GSM1347344 ,
GSM1347345 ,
GSM1347346 ,
GSM1347347 ,
GSM1347348 ,
GSM1347349 ,
GSM1347350 ,
GSM1347351 ,
GSM1347352 ,
GSM1347353 ,
GSM1347354 ,
GSM1347355 ,
GSM1347356 ,
GSM1347357 ,
GSM1347358 ,
GSM1347359 ,
GSM1347360 ,
GSM1347361 ,
GSM1347362 ,
GSM1347363 ,
GSM1347364 ,
GSM1347365 ,
GSM1347366 ,
GSM1347367 ,
GSM1347368 ,
GSM1347369 ,
GSM1347370 ,
GSM1347371 ,
GSM1347372 ,
GSM1347373 ,
GSM1347374 ,
GSM1350424 ,
GSM1350425 ,
GSM1350426 ,
GSM1350427 ,
GSM1350428 ,
GSM1350429 ,
GSM1350430 ,
GSM1350431 ,
GSM1350432 ,
GSM1350433 ,
GSM1350434 ,
GSM1350435 ,
GSM1350436 ,
GSM1350437 ,
GSM1350438 ,
GSM1350439 ,
GSM1350440 ,
GSM1350441 ,
GSM1422778 ,
GSM1422779 ,
GSM1422780 ,
GSM1422781 ,
GSM1422782 ,
GSM1422783 ,
GSM1422784 ,
GSM1422785 ,
GSM1515406 ,
GSM1515407 ,
GSM1515408 ,
GSM1515409 ,
GSM1515410 ,
GSM1515411 ,
GSM1653171 ,
GSM1653172 ,
GSM1653173 ,
GSM1653174 ,
GSM1653175 ,
GSM1653176 ,
GSM1653177 ,
GSM1653178 ,
GSM1653179 ,
GSM1653180 ,
GSM1653181 ,
GSM1653182 ,
GSM1653183 ,
GSM1653184 ,
GSM1653185 ,
GSM1653186 ,
GSM1653187 ,
GSM1653188 ,
GSM1653189 ,
GSM1653190 ,
GSM1653191 ,
GSM1716329 ,
GSM1716330 ,
GSM1716331 ,
GSM1716332 ,
GSM1716333 ,
GSM1716334 ,
GSM1817184 ,
GSM1817185 ,
GSM1817187 ,
GSM1817189 ,
GSM1817191 ,
GSM1817192 ,
GSM1817194 ,
GSM1817196 ,
GSM1817198 ,
GSM1821235 ,
GSM1821236 ,
GSM1821237 ,
GSM1821238 ,
GSM1821239 ,
GSM1821240 ,
GSM1893478 ,
GSM1893479 ,
GSM1893480 ,
GSM1893481 ,
GSM1893482 ,
GSM1893483 ,
GSM1893484 ,
GSM1893485 ,
GSM1893486 ,
GSM1893487 ,
GSM1893488 ,
GSM1893489 ,
GSM1901906 ,
GSM1901907 ,
GSM1901908 ,
GSM1901909 ,
GSM1901910 ,
GSM1901911 ,
GSM1909854 ,
GSM1909855 ,
GSM1909856 ,
GSM1909857 ,
GSM1909858 ,
GSM1909859 ,
GSM2049391 ,
GSM2049392 ,
GSM2049393 ,
GSM2049394 ,
GSM2049395 ,
GSM2049396 ,
GSM2049397 ,
GSM2049398 ,
GSM2049399 ,
GSM2049400 ,
GSM2258542 ,
GSM2258543 ,
GSM2258544 ,
GSM2258545 ,
GSM2258546 ,
GSM2258547 ,
GSM2360982 ,
GSM2360983 ,
GSM2360984 ,
GSM2360985 ,
GSM2360986 ,
GSM2360987 ,
GSM2416853 ,
GSM2416854 ,
GSM2416855 ,
GSM2416856 ,
GSM2416857 ,
GSM2416858 ,
GSM2477646 ,
GSM2477647 ,
GSM2477648 ,
GSM2477649 ,
GSM2477650 ,
GSM2477651 ,
GSM2589480 ,
GSM2589481 ,
GSM2589482 ,
GSM2589483 ,
GSM2589484 ,
GSM2589485 ,
GSM2589486 ,
GSM2589487 ,
GSM2589488 ,
GSM2589489 ,
GSM2589490 ,
GSM2589491 ,
GSM2589492 ,
GSM2589493 ,
GSM2589494 ,
GSM2589495 ,
GSM2589496 ,
GSM2589497 ,
GSM2589498 ,
GSM2589499 ,
GSM2589500 ,
GSM2589501 ,
GSM2589502 ,
GSM2589503 ,
GSM2589504 ,
GSM2589505 ,
GSM2589506 ,
GSM2589507 ,
GSM2589508 ,
GSM2589509 ,
GSM2699702 ,
GSM2699703 ,
GSM2699704 ,
GSM2699705 ,
GSM2699706 ,
GSM2699707 ,
GSM2736042 ,
GSM2736043 ,
GSM2736044 ,
GSM2736045 ,
GSM2736046 ,
GSM2736047 ,
GSM2736048 ,
GSM2736049 ,
GSM2736050 ,
GSM2736051 ,
GSM2736052 ,
GSM2736053 ,
GSM2736054 ,
GSM2736055 ,
GSM2736056 ,
GSM2736057 ,
GSM2736058 ,
GSM2736059 ,
GSM2736060 ,
GSM2736061 ,
GSM2736062 ,
GSM2736063 ,
GSM2736064 ,
GSM2736065 ,
GSM2736066 ,
GSM2736067 ,
GSM2856459 ,
GSM2856460 ,
GSM2856461 ,
GSM2856462 ,
GSM2856463 ,
GSM2856464 ,
GSM2856465 ,
GSM2856466 ,
GSM2856467 ,
GSM2856468 ,
GSM2856469 ,
GSM2856470 ,
GSM2856471 ,
GSM2856472 ,
GSM2856473 ,
GSM2856474 ,
GSM2856475 ,
GSM2856476 ,
GSM2856477 ,
GSM2856478 ,
GSM2856479 ,
GSM2856480 ,
GSM2856481 ,
GSM2856482 ,
GSM2894557 ,
GSM2894558 ,
GSM2894559 ,
GSM2894560 ,
GSM2894561 ,
GSM2894562 ,
GSM2894563 ,
GSM2894564 ,
GSM2894565 ,
GSM2894566 ,
GSM3030961 ,
GSM3030962 ,
GSM3030963 ,
GSM3030964 ,
GSM3030965 ,
GSM3030966 ,
GSM3030967 ,
GSM3030968 ,
GSM3030969 ,
GSM3030970 ,
GSM3030971 ,
GSM3030972 ,
GSM3030973 ,
GSM3030974 ,
GSM3030975 ,
GSM3030976 ,
GSM3030977 ,
GSM3030978 ,
GSM3030979 ,
GSM3030980 ,
GSM3422473 ,
GSM3422474 ,
GSM3422475 ,
GSM3422476 ,
GSM3422477 ,
GSM3422478 ,
GSM3422479 ,
GSM3422480 ,
GSM3422481 ,
GSM3422482 ,
GSM3422483 ,
GSM3422484 ,
GSM3422485 ,
GSM3422486 ,
GSM3422487 ,
GSM3460532 ,
GSM3460533 ,
GSM3460534 ,
GSM3460535 ,
GSM3460536 ,
GSM3460537 ,
GSM3460538 ,
GSM3460539 ,
GSM3460540 ,
GSM3460541 ,
GSM3460542 ,
GSM3460543 ,
GSM3667350 ,
GSM3667351 ,
GSM3667352 ,
GSM3738609 ,
GSM3738610 ,
GSM3738611 ,
GSM3738612 ,
GSM3738613 ,
GSM3738614 ,
GSM3738615 ,
GSM3738616 ,
GSM3738617 ,
GSM3738618 ,
GSM3738619 ,
GSM3738620 ,
GSM4486170 ,
GSM4486171 ,
GSM4486172 ,
GSM4486173 ,
GSM4486174 ,
GSM4486175 ,
GSM4876613 ,
GSM4876614 ,
GSM4876615 ,
GSM4876616 ,
GSM4952589 ,
GSM4952590 ,
GSM4952591 ,
GSM4952592 ,
GSM4952593 ,
GSM4952594 ,
GSM4952595 ,
GSM4952596 ,
GSM4952597 ,
GSM4952598 ,
GSM4952599 ,
GSM4952600 ,
GSM4952601 ,
GSM4952602 ,
GSM4952603 ,
GSM4952604 ,
GSM4952605 ,
GSM4952606 ,
GSM4952607 ,
GSM4952608 ,
GSM4952609 ,
GSM4952610 ,
GSM4952611 ,
GSM4952612 ,
GSM4952613 ,
GSM4952614 ,
GSM4952615 ,
GSM4952616 ,
GSM4952617 ,
GSM4952618 ,
GSM6294282 ,
GSM6294283 ,
GSM6294284 ,
GSM6294285 ,
GSM6294286 ,
GSM6294287 ,
GSM6294288 ,
GSM6294289 ,
GSM6294290 ,
GSM6294291 ,
GSM6294292 ,
GSM6294293 ,
GSM6294294 ,
GSM6294295 ,
GSM6294296 ,
GSM6294297 ,
GSM6294298 ,
GSM6294299
Series (31)
GSE55853
Dynamic gene expression by putative hair-cell progenitors during regeneration in the zebrafish lateral line
GSE56015
Runx+ HSPC, kdrl+ endothelial, and negative cells sorted from DMSO- or Lycorine-treated 3 dpf zebrafish embryos
GSE58944
Gene expression data from myelomonocytes and whole kidney marrows in zebrafish adult kidney after deletion of miR-142-3p
GSE61823
Emergence of neural crest identity is a key early step in melanoma formation [Affymetrix]
GSE67665
Transcriptome profiling times series of zebrafish heart regeneration
GSE70049
Transcriptional profiling of setb morphants
GSE70750
Gene expression in zebrafish following knockdown of pitx2 or tbx5
GSE70881
Expression analysis of draculin (drl) expressing cells in embryonic zebrafish
GSE73427
Expression data from zebrafish embryos
GSE73739
Transcriptional and Behavioral Responses of Zebrafish Larvae to Microcystin-LR Exposure
GSE74098
Gene expression profiling of zebrafish (Danio rerio) in response to nutritional supplementation with mastic essential oil from Pistacia lentiscus var. chia
GSE75356
A zebrafish melanoma model reveals emergence of neural crest identity during melanoma initiation
GSE77335
Expression data from adult zebrafish exposed to low level TCDD
GSE85149
Transcriptome profiling of zebrafish brain under hypoxia
GSE89215
Expression data from control and demylination zebrafish at 10dpf
GSE90875
Expression data from zebrafish embryos
GSE94532
Expression data from 48 hpf WT and mne mutant zebrafish
GSE98217
Activation of innate immune pathways after brain injury promotes scar formation and impairs tissue recovery
GSE101138
Expression data from Zebrafish larvae at 4dpf
GSE102400
The aryl hydrocarbon receptor pathway defines the time frame for restorative neurogenesis
GSE106875
Microarray-based transcriptomic responses of zebrafish embryos exposed to 2 µM TDCIPP from 0.75 hpf to 2 and 6 hpf
GSE108281
Expression data from wildtype and islet2a mutant and morphant embryos
GSE111446
Transgenerational expression data from adult zebrafish exposed to low level TCDD
GSE120962
Gene expression data from the heart during regeneration in a zebrafish model of heart failure
GSE122201
Pre-neural serotonin influences late embryonic development and behavior patterns in zebrafish. Expression data from 2 and 4 dpf zebrafish larvae.
GSE128217
Gene expression profiling in brain of sleep-deprived and fear conditioned zebrafish groups
GSE130433
The vitamin B12 processing enzyme, mmachc, is essential for zebrafish survival, growth and retinal morphology
GSE148923
Investigation of genetic compensation in tdp1-/- zebrafish embryos
GSE160663
Differential gene expression analysis of eys+/-; lrp5+/- zebrafish eye by microarray
GSE162474
Grb10a knockdown in Danio rerio during early life alters growth and cardiometabolic function associated with a remodelled transcriptome
GSE207538
Cell autonomous role of nuclear FGF in gene expression patterning during organogenesis
Data table header descriptions
ID
transcript_cluster_id
seqname
chromosome number
strand
(+|-)
start
(integer). Coordinates are standard 1-based (length=stop-start+1).
stop
(integer). Coordinates are standard 1-based (length=stop-start+1).
total_probes
Total number of probes contained by this transcript cluster.
gene_assignment
Gene name(s) for each assigned mRNA for mRNAs that corresponds to known genes. (multipart)
mrna_assignment
Public mRNAs that should be detected by this probe set based on sequence alignment determined at the time of the current NetAffx annotation update. (multipart).
swissprot
unigene
GO_biological_process
GO_cellular_component
GO_molecular_function
pathway
protein_domains
crosshyb_type
category
Array design category of the transcript cluster
SPOT_ID
genomic location of the transcript cluster in the version of the genome assembly used at annotation time. Coordinates are standard 1-based (length=stop-start+1).
Data table
ID
seqname
strand
start
stop
total_probes
gene_assignment
mrna_assignment
swissprot
unigene
GO_biological_process
GO_cellular_component
GO_molecular_function
pathway
protein_domains
crosshyb_type
category
SPOT_ID
12953446
chr1
-
10005990
10006759
16
---
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---
---
---
---
---
---
---
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chr1(-):10005990-10006759
12953448
chr1
-
10008204
10258954
72
ENSDART00000009886 // dmd // dystrophin // --- // 83773 /// NM_131785 // dmd // dystrophin // --- // 83773 /// BC095190 // dmd // dystrophin // --- // 83773 /// ENSDART00000102903 // dmd // dystrophin // --- // 83773 /// AF339031 // dmd // dystrophin // --- // 83773 /// AY162403 // dmd // dystrophin // --- // 83773 /// ENSDART00000144095 // dmd // dystrophin // --- // 83773 /// AF339032 // dmd // dystrophin // --- // 83773 /// ENSDART00000138275 // dmd // dystrophin // --- // 83773 /// ENSDART00000102923 // dmd // dystrophin // --- // 83773 /// ENSDART00000135563 // dmd // dystrophin // --- // 83773 /// ENSDART00000131744 // dmd // dystrophin // --- // 83773 /// ENSDART00000007013 // dmd // dystrophin // --- // 83773 /// ENSDART00000126518 // dmd // dystrophin // --- // 83773 /// ENSDART00000141052 // dmd // dystrophin // --- // 83773 /// ENSDART00000148305 // dmd // dystrophin // --- // 83773
ENSDART00000009886 // ENSEMBL // cdna:novel chromosome:Zv9:1:10008204:10068890:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 17 // 12 // 12 // 0 /// NM_131785 // RefSeq // Danio rerio dystrophin (dmd), mRNA. // chr1 // 100 // 14 // 10 // 10 // 0 /// BC095190 // GenBank // Danio rerio dystrophin, mRNA (cDNA clone MGC:110165 IMAGE:7290297), complete cds. // chr1 // 100 // 14 // 10 // 10 // 0 /// ENSDART00000102903 // ENSEMBL // cdna:known chromosome:Zv9:1:10008302:10258954:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 90 // 65 // 65 // 0 /// AF339031 // GenBank // Danio rerio dystrophin (dmd) mRNA, partial cds, alternatively spliced. // chr1 // 100 // 29 // 21 // 21 // 0 /// AY162403 // GenBank // Danio rerio dystrophin (dmd) mRNA, partial cds. // chr1 // 100 // 11 // 8 // 8 // 0 /// ENSDART00000144095 // ENSEMBL // cdna:known chromosome:Zv9:1:10076873:10087437:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:processed_transcript // chr1 // 100 // 10 // 7 // 7 // 0 /// AF339032 // GenBank // Danio rerio dystrophin variant Dp71 (dmd) mRNA, partial cds, alternatively spliced. // chr1 // 100 // 8 // 6 // 6 // 0 /// ENSDART00000138275 // ENSEMBL // cdna:known chromosome:Zv9:1:10008211:10033502:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:processed_transcript // chr1 // 100 // 7 // 5 // 5 // 0 /// ENSDART00000102923 // ENSEMBL // cdna:known chromosome:Zv9:1:10084617:10092172:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:processed_transcript // chr1 // 100 // 7 // 5 // 5 // 0 /// ENSDART00000135563 // ENSEMBL // cdna:known chromosome:Zv9:1:10008211:10024929:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:processed_transcript // chr1 // 100 // 6 // 4 // 4 // 0 /// ENSDART00000131744 // ENSEMBL // cdna:known chromosome:Zv9:1:10056568:10068889:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:retained_intron // chr1 // 100 // 6 // 4 // 4 // 0 /// ENSDART00000007013 // ENSEMBL // cdna:novel chromosome:Zv9:1:10008204:10098074:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 29 // 21 // 21 // 0 /// ENSDART00000126518 // ENSEMBL // cdna:novel chromosome:Zv9:1:10036866:10068820:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 8 // 6 // 6 // 0 /// ENSDART00000141052 // ENSEMBL // cdna:novel chromosome:Zv9:1:10008302:10031304:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 4 // 3 // 3 // 0 /// ENSDART00000148305 // ENSEMBL // cdna:novel chromosome:Zv9:1:10009847:10024899:-1 gene:ENSDARG00000008487 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 4 // 3 // 3 // 0 /// GENSCAN00000008933 // ENSEMBL // cdna:genscan chromosome:Zv9:1:10008302:10185493:-1 transcript_biotype:protein_coding // chr1 // 100 // 75 // 54 // 54 // 0 /// GENSCAN00000008936 // ENSEMBL // cdna:genscan chromosome:Zv9:1:10192482:10290582:-1 transcript_biotype:protein_coding // chr1 // 100 // 8 // 6 // 6 // 0
BC095190 // Q503T6 /// AF339031 // Q90ZT1 /// AY162403 // Q6YBR7 /// AF339032 // Q90ZT0
---
ENSDART00000009886 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000009886 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000009886 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000009886 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000009886 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// NM_131785 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// NM_131785 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// NM_131785 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// NM_131785 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// NM_131785 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// BC095190 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// BC095190 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// BC095190 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// BC095190 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// BC095190 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// ENSDART00000102903 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000102903 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000102903 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000102903 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000102903 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// AF339031 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// AF339031 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// AF339031 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// AF339031 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// AF339031 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// AY162403 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// AY162403 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// AY162403 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// AY162403 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// AY162403 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// ENSDART00000144095 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000144095 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000144095 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000144095 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000144095 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// AF339032 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// AF339032 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// AF339032 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// AF339032 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// AF339032 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// ENSDART00000138275 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000138275 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000138275 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000138275 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000138275 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// ENSDART00000102923 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000102923 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000102923 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000102923 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000102923 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// ENSDART00000135563 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000135563 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000135563 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000135563 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000135563 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// ENSDART00000131744 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000131744 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000131744 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000131744 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000131744 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// ENSDART00000007013 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000007013 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000007013 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000007013 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000007013 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// ENSDART00000126518 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000126518 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000126518 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000126518 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000126518 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// ENSDART00000141052 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000141052 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000141052 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000141052 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000141052 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype /// ENSDART00000148305 // GO:0007519 // skeletal muscle tissue development // inferred from mutant phenotype /// ENSDART00000148305 // GO:0016203 // muscle attachment // inferred from mutant phenotype /// ENSDART00000148305 // GO:0045214 // sarcomere organization // inferred from mutant phenotype /// ENSDART00000148305 // GO:0048741 // skeletal muscle fiber development // inferred from mutant phenotype /// ENSDART00000148305 // GO:0055002 // striated muscle cell development // inferred from mutant phenotype
ENSDART00000009886 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000009886 // GO:0042383 // sarcolemma // inferred from direct assay /// NM_131785 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// NM_131785 // GO:0042383 // sarcolemma // inferred from direct assay /// BC095190 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// BC095190 // GO:0042383 // sarcolemma // inferred from direct assay /// ENSDART00000102903 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000102903 // GO:0042383 // sarcolemma // inferred from direct assay /// AF339031 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// AF339031 // GO:0042383 // sarcolemma // inferred from direct assay /// AY162403 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// AY162403 // GO:0042383 // sarcolemma // inferred from direct assay /// ENSDART00000144095 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000144095 // GO:0042383 // sarcolemma // inferred from direct assay /// AF339032 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// AF339032 // GO:0042383 // sarcolemma // inferred from direct assay /// ENSDART00000138275 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000138275 // GO:0042383 // sarcolemma // inferred from direct assay /// ENSDART00000102923 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000102923 // GO:0042383 // sarcolemma // inferred from direct assay /// ENSDART00000135563 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000135563 // GO:0042383 // sarcolemma // inferred from direct assay /// ENSDART00000131744 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000131744 // GO:0042383 // sarcolemma // inferred from direct assay /// ENSDART00000007013 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000007013 // GO:0042383 // sarcolemma // inferred from direct assay /// ENSDART00000126518 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000126518 // GO:0042383 // sarcolemma // inferred from direct assay /// ENSDART00000141052 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000141052 // GO:0042383 // sarcolemma // inferred from direct assay /// ENSDART00000148305 // GO:0016010 // dystrophin-associated glycoprotein complex // non-traceable author statement /// ENSDART00000148305 // GO:0042383 // sarcolemma // inferred from direct assay
ENSDART00000009886 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000009886 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// NM_131785 // GO:0003779 // actin binding // inferred from electronic annotation /// NM_131785 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// BC095190 // GO:0003779 // actin binding // inferred from electronic annotation /// BC095190 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSDART00000102903 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000102903 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// AF339031 // GO:0003779 // actin binding // inferred from electronic annotation /// AF339031 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// AY162403 // GO:0003779 // actin binding // inferred from electronic annotation /// AY162403 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSDART00000144095 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000144095 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// AF339032 // GO:0003779 // actin binding // inferred from electronic annotation /// AF339032 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSDART00000138275 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000138275 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSDART00000102923 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000102923 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSDART00000135563 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000135563 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSDART00000131744 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000131744 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSDART00000007013 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000007013 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSDART00000126518 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000126518 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSDART00000141052 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000141052 // GO:0008270 // zinc ion binding // inferred from electronic annotation /// ENSDART00000148305 // GO:0003779 // actin binding // inferred from electronic annotation /// ENSDART00000148305 // GO:0008270 // zinc ion binding // inferred from electronic annotation
---
ENSDART00000009886 // Pfam // IPR000433 // Zinc finger, ZZ-type /// ENSDART00000009886 // Pfam // IPR015153 // EF-hand domain, type 1 /// ENSDART00000009886 // Pfam // IPR015154 // EF-hand domain, type 2 /// ENSDART00000102903 // Pfam // IPR000433 // Zinc finger, ZZ-type /// ENSDART00000102903 // Pfam // IPR001202 // WW/Rsp5/WWP /// ENSDART00000102903 // Pfam // IPR001715 // Calponin homology domain /// ENSDART00000102903 // Pfam // IPR002017 // Spectrin repeat /// ENSDART00000102903 // Pfam // IPR015153 // EF-hand domain, type 1 /// ENSDART00000102903 // Pfam // IPR015154 // EF-hand domain, type 2 /// ENSDART00000007013 // Pfam // IPR000433 // Zinc finger, ZZ-type /// ENSDART00000007013 // Pfam // IPR001202 // WW/Rsp5/WWP /// ENSDART00000007013 // Pfam // IPR002017 // Spectrin repeat /// ENSDART00000007013 // Pfam // IPR015153 // EF-hand domain, type 1 /// ENSDART00000007013 // Pfam // IPR015154 // EF-hand domain, type 2 /// ENSDART00000126518 // Pfam // IPR000433 // Zinc finger, ZZ-type /// ENSDART00000126518 // Pfam // IPR015153 // EF-hand domain, type 1 /// ENSDART00000126518 // Pfam // IPR015154 // EF-hand domain, type 2
---
main
chr1(-):10008204-10258954
12952273
chr1
-
100215
100692
12
---
---
---
---
---
---
---
---
---
---
---
chr1(-):100215-100692
12952565
chr1
-
1022223
1023093
20
XM_002666980 // LOC100332351 // uncharacterized LOC100332351 // --- // 100332351
XM_002666980 // RefSeq // PREDICTED: Danio rerio hypothetical protein LOC100332351 (LOC100332351), mRNA. // chr1 // 100 // 35 // 7 // 7 // 0
---
---
---
---
---
---
---
---
main
chr1(-):1022223-1023093
12952568
chr1
-
1023114
1031869
17
XM_002666980 // LOC100332351 // uncharacterized LOC100332351 // --- // 100332351
XM_002666980 // RefSeq // PREDICTED: Danio rerio hypothetical protein LOC100332351 (LOC100332351), mRNA. // chr1 // 100 // 100 // 19 // 19 // 0 /// GENSCAN00000016918 // ENSEMBL // cdna:genscan chromosome:Zv9:1:989727:1029302:-1 transcript_biotype:protein_coding // chr1 // 100 // 88 // 15 // 15 // 0
---
---
---
---
---
---
---
---
main
chr1(-):1023114-1031869
12953523
chr1
-
10270507
10290582
32
BC092163 // casc5 // cancer susceptibility candidate 5 // --- // 327226
BC092163 // GenBank // Danio rerio wu:fd18f09, mRNA (cDNA clone IMAGE:7145448), partial cds. // chr1 // 91 // 72 // 21 // 23 // 0
BC092163 // Q56A53
---
---
---
---
---
---
---
main
chr1(-):10270507-10290582
12953545
chr1
-
10300970
10301476
20
---
---
---
---
---
---
---
---
---
---
---
chr1(-):10300970-10301476
12953548
chr1
-
10308297
10556009
35
ENSDART00000141238 // zgc:171522 // zgc:171522 // --- // 555553 /// XM_678102 // zgc:171522 // zgc:171522 // --- // 555553 /// ENSDART00000091205 // zgc:171522 // zgc:171522 // --- // 555553 /// ENSDART00000144164 // zgc:171522 // zgc:171522 // --- // 555553
ENSDART00000141238 // ENSEMBL // cdna:novel chromosome:Zv9:1:10308297:10556009:-1 gene:ENSDARG00000062854 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 94 // 33 // 33 // 0 /// XM_678102 // RefSeq // PREDICTED: Danio rerio zgc:171522 (zgc:171522), mRNA. // chr1 // 100 // 94 // 33 // 33 // 0 /// ENSDART00000091205 // ENSEMBL // cdna:known chromosome:Zv9:1:10308653:10556008:-1 gene:ENSDARG00000062854 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 94 // 33 // 33 // 0 /// ENSDART00000144164 // ENSEMBL // cdna:putative chromosome:Zv9:1:10523585:10556007:-1 gene:ENSDARG00000062854 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 9 // 3 // 3 // 0 /// GENSCAN00000008909 // ENSEMBL // cdna:genscan chromosome:Zv9:1:10308653:10471754:-1 transcript_biotype:protein_coding // chr1 // 100 // 80 // 28 // 28 // 0
---
---
ENSDART00000141238 // GO:0008150 // biological_process // no biological data available /// XM_678102 // GO:0008150 // biological_process // no biological data available /// ENSDART00000091205 // GO:0008150 // biological_process // no biological data available /// ENSDART00000144164 // GO:0008150 // biological_process // no biological data available
ENSDART00000141238 // GO:0005575 // cellular_component // no biological data available /// XM_678102 // GO:0005575 // cellular_component // no biological data available /// ENSDART00000091205 // GO:0005575 // cellular_component // no biological data available /// ENSDART00000144164 // GO:0005575 // cellular_component // no biological data available
ENSDART00000141238 // GO:0003674 // molecular_function // no biological data available /// XM_678102 // GO:0003674 // molecular_function // no biological data available /// ENSDART00000091205 // GO:0003674 // molecular_function // no biological data available /// ENSDART00000144164 // GO:0003674 // molecular_function // no biological data available
---
ENSDART00000141238 // Pfam // IPR003961 // Fibronectin, type III /// ENSDART00000141238 // Pfam // IPR013098 // Immunoglobulin I-set /// ENSDART00000141238 // Pfam // IPR013106 // Immunoglobulin V-set /// ENSDART00000141238 // Pfam // IPR013151 // Immunoglobulin /// ENSDART00000091205 // Pfam // IPR003961 // Fibronectin, type III /// ENSDART00000091205 // Pfam // IPR013098 // Immunoglobulin I-set /// ENSDART00000091205 // Pfam // IPR013106 // Immunoglobulin V-set /// ENSDART00000091205 // Pfam // IPR013151 // Immunoglobulin /// ENSDART00000144164 // Pfam // IPR013098 // Immunoglobulin I-set /// ENSDART00000144164 // Pfam // IPR013151 // Immunoglobulin
---
main
chr1(-):10308297-10556009
12952574
chr1
-
1045570
1046991
8
---
---
---
---
---
---
---
---
---
---
---
chr1(-):1045570-1046991
12952580
chr1
-
1061242
1061700
18
---
---
---
---
---
---
---
---
---
---
---
chr1(-):1061242-1061700
12953586
chr1
-
10776921
10777952
16
XM_001338431 // LOC798013 // carbohydrate sulfotransferase 12-like // --- // 798013 /// ENSDART00000140725 // LOC798013 // carbohydrate sulfotransferase 12-like // --- // 798013
XM_001338431 // RefSeq // PREDICTED: Danio rerio carbohydrate sulfotransferase 12-like (LOC798013), mRNA. // chr1 // 100 // 100 // 17 // 17 // 0 /// ENSDART00000140725 // ENSEMBL // cdna:novel chromosome:Zv9:1:10776921:10777952:-1 gene:ENSDARG00000092242 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 17 // 17 // 0 /// GENSCAN00000008929 // ENSEMBL // cdna:genscan chromosome:Zv9:1:10776921:10777952:-1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 17 // 17 // 0
---
---
---
---
---
---
ENSDART00000140725 // Pfam // IPR005331 // Sulfotransferase
---
main
chr1(-):10776921-10777952
12953588
chr1
-
10787133
10788026
6
XM_003197630 // LOC100538167 // carbohydrate sulfotransferase 12-like // --- // 100538167 /// ENSDART00000136093 // LOC100538167 // carbohydrate sulfotransferase 12-like // --- // 100538167
XM_003197630 // RefSeq // PREDICTED: Danio rerio carbohydrate sulfotransferase 12-like (LOC100538167), mRNA. // chr1 // 100 // 100 // 8 // 8 // 0 /// ENSDART00000136093 // ENSEMBL // cdna:novel chromosome:Zv9:1:10787133:10788026:-1 gene:ENSDARG00000092200 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 8 // 8 // 0 /// GENSCAN00000008924 // ENSEMBL // cdna:genscan chromosome:Zv9:1:10787133:10788179:-1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 8 // 8 // 0
---
---
---
---
---
---
ENSDART00000136093 // Pfam // IPR005331 // Sulfotransferase
---
main
chr1(-):10787133-10788026
12953590
chr1
-
10796396
10797265
7
ENSDART00000131668 // LOC797712 // carbohydrate sulfotransferase 12-like // --- // 797712
ENSDART00000131668 // ENSEMBL // cdna:novel chromosome:Zv9:1:10796396:10797265:-1 gene:ENSDARG00000093636 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 9 // 9 // 0 /// GENSCAN00000008914 // ENSEMBL // cdna:genscan chromosome:Zv9:1:10796396:10797418:-1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 9 // 9 // 0
---
---
---
---
---
---
ENSDART00000131668 // Pfam // IPR005331 // Sulfotransferase
---
main
chr1(-):10796396-10797265
12953592
chr1
-
10807375
10812757
21
ENSDART00000134588 // LOC100536144 // carbohydrate sulfotransferase 12-like // --- // 100536144 /// ENSDART00000134588 // LOC797641 // carbohydrate sulfotransferase 12-like // --- // 797641
ENSDART00000134588 // ENSEMBL // cdna:novel chromosome:Zv9:1:10807375:10812757:-1 gene:ENSDARG00000095482 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 24 // 24 // 0 /// GENSCAN00000008921 // ENSEMBL // cdna:genscan chromosome:Zv9:1:10807375:10808412:-1 transcript_biotype:protein_coding // chr1 // 100 // 43 // 9 // 9 // 0
---
---
---
---
---
---
ENSDART00000134588 // Pfam // IPR005331 // Sulfotransferase
---
main
chr1(-):10807375-10812757
12953595
chr1
-
10822605
10823555
15
ENSDART00000139755 // LOC797576 // carbohydrate sulfotransferase 12-like // --- // 797576 /// XM_001338014 // LOC797576 // carbohydrate sulfotransferase 12-like // --- // 797576
ENSDART00000139755 // ENSEMBL // cdna:novel chromosome:Zv9:1:10822605:10823555:-1 gene:ENSDARG00000094981 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 15 // 15 // 0 /// XM_001338014 // RefSeq // PREDICTED: Danio rerio carbohydrate sulfotransferase 12-like (LOC797576), mRNA. // chr1 // 100 // 93 // 14 // 14 // 0 /// GENSCAN00000008935 // ENSEMBL // cdna:genscan chromosome:Zv9:1:10822605:10823630:-1 transcript_biotype:protein_coding // chr1 // 100 // 100 // 15 // 15 // 0
---
---
---
---
---
---
ENSDART00000139755 // Pfam // IPR005331 // Sulfotransferase
---
main
chr1(-):10822605-10823555
12953597
chr1
-
10834058
10834541
5
---
---
---
---
---
---
---
---
---
---
---
chr1(-):10834058-10834541
12953599
chr1
-
10852002
10870648
18
ENSDART00000090689 // brat1 // BRCA1-associated ATM activator 1 // --- // 678547 /// NM_001040305 // brat1 // BRCA1-associated ATM activator 1 // --- // 678547 /// BC115289 // brat1 // BRCA1-associated ATM activator 1 // --- // 678547
ENSDART00000090689 // ENSEMBL // cdna:known chromosome:Zv9:1:10852002:10870648:-1 gene:ENSDARG00000062585 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 24 // 24 // 0 /// NM_001040305 // RefSeq // Danio rerio BRCA1-associated ATM activator 1 (brat1), mRNA. // chr1 // 100 // 100 // 22 // 22 // 0 /// BC115289 // GenBank // Danio rerio zgc:136845, mRNA (cDNA clone MGC:136845 IMAGE:7268110), complete cds. // chr1 // 100 // 100 // 22 // 22 // 0
BC115289 // Q1RLU1
---
ENSDART00000090689 // GO:0010212 // response to ionizing radiation // inferred from sequence or structural similarity /// NM_001040305 // GO:0010212 // response to ionizing radiation // inferred from sequence or structural similarity /// BC115289 // GO:0010212 // response to ionizing radiation // inferred from sequence or structural similarity
ENSDART00000090689 // GO:0005634 // nucleus // inferred from electronic annotation /// ENSDART00000090689 // GO:0005634 // nucleus // inferred from sequence or structural similarity /// NM_001040305 // GO:0005634 // nucleus // inferred from electronic annotation /// NM_001040305 // GO:0005634 // nucleus // inferred from sequence or structural similarity /// BC115289 // GO:0005634 // nucleus // inferred from electronic annotation /// BC115289 // GO:0005634 // nucleus // inferred from sequence or structural similarity
---
---
---
---
main
chr1(-):10852002-10870648
12952582
chr1
-
1088740
1110311
18
NM_131603 // runx1 // runt-related transcription factor 1 // --- // 58126 /// AF391125 // runx1 // runt-related transcription factor 1 // --- // 58126
NM_131603 // RefSeq // Danio rerio runt-related transcription factor 1 (runx1), mRNA. // chr1 // 91 // 61 // 10 // 11 // 0 /// AF391125 // GenBank // Danio rerio Runx1 transcription factor (runx1) mRNA, complete cds. // chr1 // 91 // 61 // 10 // 11 // 0 /// ENSDART00000130697 // ENSEMBL // cdna:known chromosome:Zv9:1:1088740:1093175:-1 gene:ENSDARG00000087646 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 61 // 11 // 11 // 0
AF391125 // Q9DGB8
---
NM_131603 // GO:0001568 // blood vessel development // inferred from mutant phenotype /// NM_131603 // GO:0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// NM_131603 // GO:0007399 // nervous system development // inferred from mutant phenotype /// NM_131603 // GO:0010628 // positive regulation of gene expression // inferred from genetic interaction /// NM_131603 // GO:0010628 // positive regulation of gene expression // inferred from mutant phenotype /// NM_131603 // GO:0030097 // hemopoiesis // inferred from mutant phenotype /// NM_131603 // GO:0030099 // myeloid cell differentiation // inferred from genetic interaction /// NM_131603 // GO:0030099 // myeloid cell differentiation // inferred from mutant phenotype /// NM_131603 // GO:0035162 // embryonic hemopoiesis // inferred from mutant phenotype /// NM_131603 // GO:0060216 // definitive hemopoiesis // inferred from mutant phenotype /// AF391125 // GO:0001568 // blood vessel development // inferred from mutant phenotype /// AF391125 // GO:0006355 // regulation of transcription, DNA-dependent // inferred from electronic annotation /// AF391125 // GO:0007399 // nervous system development // inferred from mutant phenotype /// AF391125 // GO:0010628 // positive regulation of gene expression // inferred from genetic interaction /// AF391125 // GO:0010628 // positive regulation of gene expression // inferred from mutant phenotype /// AF391125 // GO:0030097 // hemopoiesis // inferred from mutant phenotype /// AF391125 // GO:0030099 // myeloid cell differentiation // inferred from genetic interaction /// AF391125 // GO:0030099 // myeloid cell differentiation // inferred from mutant phenotype /// AF391125 // GO:0035162 // embryonic hemopoiesis // inferred from mutant phenotype /// AF391125 // GO:0060216 // definitive hemopoiesis // inferred from mutant phenotype
NM_131603 // GO:0005634 // nucleus // inferred from electronic annotation /// AF391125 // GO:0005634 // nucleus // inferred from electronic annotation
NM_131603 // GO:0003677 // DNA binding // inferred from electronic annotation /// NM_131603 // GO:0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// NM_131603 // GO:0005524 // ATP binding // inferred from electronic annotation /// NM_131603 // GO:0043565 // sequence-specific DNA binding // inferred from physical interaction /// AF391125 // GO:0003677 // DNA binding // inferred from electronic annotation /// AF391125 // GO:0003700 // sequence-specific DNA binding transcription factor activity // inferred from electronic annotation /// AF391125 // GO:0005524 // ATP binding // inferred from electronic annotation /// AF391125 // GO:0043565 // sequence-specific DNA binding // inferred from physical interaction
---
ENSDART00000130697 // Pfam // IPR013524 // Acute myeloid leukemia 1 (AML 1)/Runt
---
main
chr1(-):1088740-1110311
12953614
chr1
-
10957101
10958420
21
---
ENSDART00000054790 // ENSEMBL // cdna:known chromosome:Zv9:1:10957101:10958420:-1 gene:ENSDARG00000037621 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 23 // 23 // 0
---
---
---
---
---
---
ENSDART00000054790 // Pfam // IPR000276 // GPCR, rhodopsin-like, 7TM
---
main
chr1(-):10957101-10958420
12953616
chr1
-
10962667
11031476
22
ENSDART00000033361 // ttyh3b // tweety homolog 3b (Drosophila) // --- // 798421 /// ENSDART00000131116 // ttyh3b // tweety homolog 3b (Drosophila) // --- // 798421 /// NM_001037387 // ttyh3b // tweety homolog 3b (Drosophila) // --- // 798421 /// BC109434 // ttyh3b // tweety homolog 3b (Drosophila) // --- // 798421
ENSDART00000033361 // ENSEMBL // cdna:known chromosome:Zv9:1:10962667:11031476:-1 gene:ENSDARG00000007678 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 100 // 22 // 22 // 0 /// ENSDART00000131116 // ENSEMBL // cdna:known chromosome:Zv9:1:10962801:11030729:-1 gene:ENSDARG00000007678 gene_biotype:protein_coding transcript_biotype:protein_coding // chr1 // 100 // 82 // 18 // 18 // 0 /// NM_001037387 // RefSeq // Danio rerio tweety homolog 3b (Drosophila) (ttyh3b), mRNA. // chr1 // 81 // 73 // 13 // 16 // 0 /// BC109434 // GenBank // Danio rerio zgc:123242, mRNA (cDNA clone MGC:123242 IMAGE:7449139), complete cds. // chr1 // 81 // 73 // 13 // 16 // 0
BC109434 // Q32LT7
---
ENSDART00000033361 // GO:0006810 // transport // inferred from electronic annotation /// ENSDART00000033361 // GO:0006811 // ion transport // inferred from electronic annotation /// ENSDART00000033361 // GO:0006821 // chloride transport // inferred from electronic annotation /// ENSDART00000131116 // GO:0006810 // transport // inferred from electronic annotation /// ENSDART00000131116 // GO:0006811 // ion transport // inferred from electronic annotation /// ENSDART00000131116 // GO:0006821 // chloride transport // inferred from electronic annotation /// NM_001037387 // GO:0006810 // transport // inferred from electronic annotation /// NM_001037387 // GO:0006811 // ion transport // inferred from electronic annotation /// NM_001037387 // GO:0006821 // chloride transport // inferred from electronic annotation /// BC109434 // GO:0006810 // transport // inferred from electronic annotation /// BC109434 // GO:0006811 // ion transport // inferred from electronic annotation /// BC109434 // GO:0006821 // chloride transport // inferred from electronic annotation
ENSDART00000033361 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSDART00000033361 // GO:0016020 // membrane // inferred from electronic annotation /// ENSDART00000033361 // GO:0016021 // integral to membrane // inferred from electronic annotation /// ENSDART00000033361 // GO:0034707 // chloride channel complex // inferred from electronic annotation /// ENSDART00000131116 // GO:0005886 // plasma membrane // inferred from electronic annotation /// ENSDART00000131116 // GO:0016020 // membrane // inferred from electronic annotation /// ENSDART00000131116 // GO:0016021 // integral to membrane // inferred from electronic annotation /// ENSDART00000131116 // GO:0034707 // chloride channel complex // inferred from electronic annotation /// NM_001037387 // GO:0005886 // plasma membrane // inferred from electronic annotation /// NM_001037387 // GO:0016020 // membrane // inferred from electronic annotation /// NM_001037387 // GO:0016021 // integral to membrane // inferred from electronic annotation /// NM_001037387 // GO:0034707 // chloride channel complex // inferred from electronic annotation /// BC109434 // GO:0005886 // plasma membrane // inferred from electronic annotation /// BC109434 // GO:0016020 // membrane // inferred from electronic annotation /// BC109434 // GO:0016021 // integral to membrane // inferred from electronic annotation /// BC109434 // GO:0034707 // chloride channel complex // inferred from electronic annotation
ENSDART00000033361 // GO:0005216 // ion channel activity // inferred from electronic annotation /// ENSDART00000033361 // GO:0005254 // chloride channel activity // inferred from electronic annotation /// ENSDART00000131116 // GO:0005216 // ion channel activity // inferred from electronic annotation /// ENSDART00000131116 // GO:0005254 // chloride channel activity // inferred from electronic annotation /// NM_001037387 // GO:0005216 // ion channel activity // inferred from electronic annotation /// NM_001037387 // GO:0005254 // chloride channel activity // inferred from electronic annotation /// BC109434 // GO:0005216 // ion channel activity // inferred from electronic annotation /// BC109434 // GO:0005254 // chloride channel activity // inferred from electronic annotation
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ENSDART00000033361 // Pfam // IPR006990 // Tweety /// ENSDART00000131116 // Pfam // IPR006990 // Tweety
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main
chr1(-):10962667-11031476
Total number of rows: 75212 Table truncated, full table size 62270 Kbytes .
Supplementary data files not provided