GEO help: Mouse over screen elements for information.
Status
Public on Nov 16, 2006
Title
Netherlands Cancer Institute human 3.5k BAC array
Technology type
spotted DNA/cDNA
Distribution
non-commercial
Organism
Homo sapiens Manufacturer
the Netherlands Cancer Institute - Central Microarray Facility
Manufacture protocol
Degenerate oligonucleotide PCR-products from all BAC clones were prepared for spotting according to detailed protocols (Pinkel et al, 1998) with some modifications (Alers et al, 1999). All clones (three replicates for each probe) were spotted in randomised fashion across 48 subarrays, each containing 270 spots.
Support
glass
Coating
other
Description
Slides: Code Link Activated Slides (Amersham Biosciences, Prod. No. 300011 00)
Submission date
Nov 14, 2006
Last update date
Oct 31, 2011
Contact name
Simon A Joosse
E-mail(s)
s.joosse@in-silico.net Organization name
University Medical Center Hamburg-Eppendorf
Department
Institute of Tumor Biology
Street address
Martinistrasse 52
City
Hamburg
ZIP/Postal code
20246
Country
Germany
Samples (582)
GSM152556 , GSM152557 , GSM152558 , GSM152559 , GSM152560 , GSM152561
GSM152562 ,
GSM152563 ,
GSM154096 ,
GSM154097 ,
GSM154098 ,
GSM154099 ,
GSM154100 ,
GSM154101 ,
GSM154102 ,
GSM154104 ,
GSM154107 ,
GSM170617 ,
GSM170619 ,
GSM170620 ,
GSM170621 ,
GSM170622 ,
GSM170623 ,
GSM170624 ,
GSM170625 ,
GSM170626 ,
GSM170627 ,
GSM170630 ,
GSM170631 ,
GSM170633 ,
GSM170634 ,
GSM170878 ,
GSM170879 ,
GSM170880 ,
GSM170881 ,
GSM170882 ,
GSM170883 ,
GSM170884 ,
GSM170885 ,
GSM228850 ,
GSM228851 ,
GSM228852 ,
GSM228853 ,
GSM228854 ,
GSM228855 ,
GSM228856 ,
GSM228857 ,
GSM228858 ,
GSM228859 ,
GSM228860 ,
GSM228861 ,
GSM228862 ,
GSM228863 ,
GSM228864 ,
GSM228865 ,
GSM228866 ,
GSM228867 ,
GSM228868 ,
GSM228869 ,
GSM228870 ,
GSM228902 ,
GSM228920 ,
GSM228921 ,
GSM228922 ,
GSM228923 ,
GSM228925 ,
GSM228926 ,
GSM230644 ,
GSM230645 ,
GSM230646 ,
GSM230647 ,
GSM230648 ,
GSM230649 ,
GSM230650 ,
GSM230651 ,
GSM230652 ,
GSM230653 ,
GSM230654 ,
GSM230655 ,
GSM230656 ,
GSM230657 ,
GSM230658 ,
GSM230659 ,
GSM230660 ,
GSM230661 ,
GSM230662 ,
GSM230699 ,
GSM230700 ,
GSM230701 ,
GSM230702 ,
GSM230703 ,
GSM230704 ,
GSM230705 ,
GSM230706 ,
GSM230707 ,
GSM230708 ,
GSM230709 ,
GSM230710 ,
GSM230711 ,
GSM230712 ,
GSM230713 ,
GSM230714 ,
GSM230715 ,
GSM230716 ,
GSM230717 ,
GSM230718 ,
GSM230831 ,
GSM230832 ,
GSM230833 ,
GSM230834 ,
GSM230835 ,
GSM230836 ,
GSM230837 ,
GSM230838 ,
GSM230839 ,
GSM414778 ,
GSM414779 ,
GSM414780 ,
GSM414781 ,
GSM414782 ,
GSM414783 ,
GSM414784 ,
GSM414809 ,
GSM414810 ,
GSM414811 ,
GSM414812 ,
GSM414813 ,
GSM414814 ,
GSM414815 ,
GSM414816 ,
GSM414817 ,
GSM414818 ,
GSM414819 ,
GSM414820 ,
GSM414821 ,
GSM414822 ,
GSM414823 ,
GSM414824 ,
GSM414825 ,
GSM414826 ,
GSM414827 ,
GSM414828 ,
GSM414829 ,
GSM414830 ,
GSM414831 ,
GSM414868 ,
GSM414869 ,
GSM414870 ,
GSM414874 ,
GSM414875 ,
GSM414877 ,
GSM414878 ,
GSM414880 ,
GSM414882 ,
GSM414884 ,
GSM414886 ,
GSM414888 ,
GSM414889 ,
GSM414890 ,
GSM414891 ,
GSM414892 ,
GSM414894 ,
GSM415090 ,
GSM415092 ,
GSM415093 ,
GSM415094 ,
GSM415095 ,
GSM415096 ,
GSM415097 ,
GSM415098 ,
GSM415099 ,
GSM415100 ,
GSM415101 ,
GSM415102 ,
GSM415103 ,
GSM415104 ,
GSM415105 ,
GSM415106 ,
GSM415107 ,
GSM415108 ,
GSM418025 ,
GSM418026 ,
GSM418027 ,
GSM418028 ,
GSM418029 ,
GSM418030 ,
GSM418031 ,
GSM418032 ,
GSM418033 ,
GSM418034 ,
GSM418035 ,
GSM418036 ,
GSM418037 ,
GSM418038 ,
GSM418039 ,
GSM418040 ,
GSM418041 ,
GSM418042 ,
GSM418043 ,
GSM418044 ,
GSM418045 ,
GSM418046 ,
GSM418047 ,
GSM418048 ,
GSM418049 ,
GSM418050 ,
GSM418051 ,
GSM418052 ,
GSM418053 ,
GSM418054 ,
GSM418055 ,
GSM418056 ,
GSM418057 ,
GSM418058 ,
GSM418059 ,
GSM418060 ,
GSM418061 ,
GSM418062 ,
GSM418063 ,
GSM418064 ,
GSM418065 ,
GSM418066 ,
GSM418067 ,
GSM418068 ,
GSM418069 ,
GSM418070 ,
GSM418071 ,
GSM418072 ,
GSM418073 ,
GSM418074 ,
GSM418075 ,
GSM418076 ,
GSM418077 ,
GSM418078 ,
GSM418079 ,
GSM418080 ,
GSM418081 ,
GSM418082 ,
GSM418083 ,
GSM418084 ,
GSM418085 ,
GSM418086 ,
GSM418087 ,
GSM418088 ,
GSM418089 ,
GSM418090 ,
GSM418091 ,
GSM418092 ,
GSM418093 ,
GSM418094 ,
GSM418095 ,
GSM418096 ,
GSM418097 ,
GSM418098 ,
GSM418099 ,
GSM418100 ,
GSM418101 ,
GSM418102 ,
GSM418103 ,
GSM418104 ,
GSM418105 ,
GSM418106 ,
GSM418107 ,
GSM418108 ,
GSM418109 ,
GSM418110 ,
GSM418111 ,
GSM418112 ,
GSM418113 ,
GSM418114 ,
GSM418115 ,
GSM418116 ,
GSM418117 ,
GSM418118 ,
GSM418119 ,
GSM418120 ,
GSM418121 ,
GSM462909 ,
GSM462910 ,
GSM462911 ,
GSM462912 ,
GSM462913 ,
GSM462914 ,
GSM462915 ,
GSM462916 ,
GSM462917 ,
GSM462918 ,
GSM462919 ,
GSM462920 ,
GSM462921 ,
GSM462922 ,
GSM462923 ,
GSM462924 ,
GSM462925 ,
GSM462926 ,
GSM462927 ,
GSM462928 ,
GSM462929 ,
GSM462930 ,
GSM462931 ,
GSM462932 ,
GSM462933 ,
GSM462934 ,
GSM462935 ,
GSM462936 ,
GSM462937 ,
GSM462938 ,
GSM462939 ,
GSM462940 ,
GSM462941 ,
GSM462942 ,
GSM462943 ,
GSM462944 ,
GSM462945 ,
GSM462946 ,
GSM462947 ,
GSM462948 ,
GSM462949 ,
GSM462950 ,
GSM462951 ,
GSM462952 ,
GSM462953 ,
GSM462954 ,
GSM462955 ,
GSM462956 ,
GSM462957 ,
GSM462958 ,
GSM462959 ,
GSM462960 ,
GSM462961 ,
GSM462962 ,
GSM462963 ,
GSM462964 ,
GSM462965 ,
GSM462966 ,
GSM467965 ,
GSM467966 ,
GSM467967 ,
GSM467968 ,
GSM467969 ,
GSM467970 ,
GSM467971 ,
GSM467972 ,
GSM467973 ,
GSM467974 ,
GSM467975 ,
GSM467976 ,
GSM467977 ,
GSM467978 ,
GSM467979 ,
GSM467980 ,
GSM467981 ,
GSM467982 ,
GSM467983 ,
GSM467984 ,
GSM467985 ,
GSM467986 ,
GSM467987 ,
GSM467988 ,
GSM467989 ,
GSM467990 ,
GSM467991 ,
GSM467992 ,
GSM467993 ,
GSM467994 ,
GSM467995 ,
GSM467996 ,
GSM467997 ,
GSM467998 ,
GSM467999 ,
GSM468000 ,
GSM468001 ,
GSM468002 ,
GSM468003 ,
GSM468004 ,
GSM468005 ,
GSM468006 ,
GSM468007 ,
GSM468008 ,
GSM468009 ,
GSM468010 ,
GSM468011 ,
GSM468012 ,
GSM515011 ,
GSM515012 ,
GSM515013 ,
GSM515014 ,
GSM515015 ,
GSM515016 ,
GSM515017 ,
GSM515018 ,
GSM515019 ,
GSM515020 ,
GSM515021 ,
GSM515022 ,
GSM515023 ,
GSM515024 ,
GSM515025 ,
GSM515026 ,
GSM515027 ,
GSM515028 ,
GSM515029 ,
GSM515030 ,
GSM515031 ,
GSM515032 ,
GSM515033 ,
GSM515034 ,
GSM515035 ,
GSM515036 ,
GSM515037 ,
GSM515038 ,
GSM515039 ,
GSM515040 ,
GSM515041 ,
GSM515042 ,
GSM515043 ,
GSM515044 ,
GSM515045 ,
GSM515046 ,
GSM515415 ,
GSM515416 ,
GSM515417 ,
GSM515418 ,
GSM515419 ,
GSM515420 ,
GSM515421 ,
GSM515422 ,
GSM515423 ,
GSM515424 ,
GSM515425 ,
GSM515426 ,
GSM515427 ,
GSM515428 ,
GSM515429 ,
GSM515430 ,
GSM515431 ,
GSM515432 ,
GSM515433 ,
GSM515434 ,
GSM515435 ,
GSM515436 ,
GSM515437 ,
GSM515438 ,
GSM515439 ,
GSM515440 ,
GSM515441 ,
GSM515442 ,
GSM515443 ,
GSM515444 ,
GSM515445 ,
GSM515446 ,
GSM515447 ,
GSM515448 ,
GSM515449 ,
GSM515450 ,
GSM515451 ,
GSM515464 ,
GSM515465 ,
GSM515466 ,
GSM515467 ,
GSM515468 ,
GSM515469 ,
GSM515470 ,
GSM515471 ,
GSM515472 ,
GSM515473 ,
GSM515474 ,
GSM515475 ,
GSM515476 ,
GSM515477 ,
GSM515478 ,
GSM515479 ,
GSM515480 ,
GSM515481 ,
GSM515482 ,
GSM515483 ,
GSM515484 ,
GSM515485 ,
GSM515486 ,
GSM515487 ,
GSM515488 ,
GSM558487 ,
GSM558488 ,
GSM558489 ,
GSM558490 ,
GSM558491 ,
GSM558492 ,
GSM558493 ,
GSM558494 ,
GSM558495 ,
GSM558496 ,
GSM558497 ,
GSM558498 ,
GSM558499 ,
GSM558500 ,
GSM558501 ,
GSM558502 ,
GSM558503 ,
GSM558504 ,
GSM558505 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (11)
GSE7122 Automated array-CGH optimized for archival formalin-fixed, paraffin-embedded tumor material
GSE9021 CGH profiles of BRCA1-mutated tumors
GSE9114 CGH profiles of sporadic breast tumors
GSE16511 CGH profiles of BRCA2-mutated breast tumors
GSE16680 arrayCGH profiles of endometrial cancer with and without prior prolonged tamoxifen treatment for primary breast cancer
GSE18626 Comparative genomic hybridization of BRCAX breast tumors
GSE20496 CGH profiles of primary colorecal cancer: metastasis-free, liver and peritoneal metastasis
GSE22401 CGH profiles of sporadic basal-like breast tumors
GSE22481 CGH profiles of primary breast carcinomas from HBOC (Hereditary Breast and Ovarian Cancer) families
GSE77604 Genomic profiling of Estrogen receptor positive BRCA1-mutated breast cancer [human 3.5k BAC array]
GSE77605 Genomic profiling of Estrogen receptor positive BRCA1-mutated breast cancer
Data table header descriptions ID CLONE_ID BAC clone name
Chr Chromosome
Genomic_pos Genomic position (bp)
3277 92 Kbytes .Supplementary data files not provided
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