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Status
Public on Jan 09, 2008
Title
Exiqon MicroRNA Array ver_208000 V8.1 lot number 20728-20399
Technology type
spotted oligonucleotide
Distribution
custom-commercial
Organisms
Homo sapiens ; Mus musculus ; Rattus norvegicus Manufacturer
Exiqon
Manufacture protocol
Locked Nucleic Acid enhanced oligonucleotides capture probes that are complementary to the mature miRNA's registered in miRBase Release 8.1 are manufactured to all have a uniform Tm of 72 degrees C. Capture probes are spotted on to glass slides in 8 different subarrays, 14 spots wide by 15 spots high, each subarray is duplicated 4 times for a total of 6720 features. The array contains 30 control capture probes: 12 positive controls, 8 negative controls and 10 probes specific for the supplied spike-in controls. Blank spots were deleted from this platform leaving a total of 1600 features.
Support
Glass
Description
A multi organism array containing microRNA's probes for most of the species annotated in the miRBase Release 8.1
Contributor(s)
Becker KG , Wood III WH Submission date
Jan 08, 2008
Last update date
Jun 22, 2020
Contact name
Supriyo De
Organization name
NIA-IRP, NIH
Department
Laboratory of Genetics and Genomics
Lab
Computational Biology & Genomics Core
Street address
251 Bayview Blvd
City
Baltimore
State/province
Maryland
ZIP/Postal code
21224
Country
USA
Samples (51)
GSM256782 , GSM256783 , GSM256784 , GSM256785 , GSM256786 , GSM256787
GSM256788 ,
GSM256789 ,
GSM256790 ,
GSM256791 ,
GSM256792 ,
GSM256793 ,
GSM256794 ,
GSM256795 ,
GSM256796 ,
GSM256797 ,
GSM256798 ,
GSM256799 ,
GSM256800 ,
GSM256801 ,
GSM256802 ,
GSM256803 ,
GSM256804 ,
GSM256805 ,
GSM256806 ,
GSM256807 ,
GSM256808 ,
GSM256809 ,
GSM256810 ,
GSM256811 ,
GSM256812 ,
GSM256813 ,
GSM256814 ,
GSM256815 ,
GSM256816 ,
GSM256817 ,
GSM256818 ,
GSM256819 ,
GSM256820 ,
GSM256821 ,
GSM256822 ,
GSM256823 ,
GSM256824 ,
GSM256825 ,
GSM256826 ,
GSM462632 ,
GSM462633 ,
GSM462634 ,
GSM677881 ,
GSM677882 ,
GSM677883 Series (3)
GSE10150 Ovarian Cancer MicroRNA
GSE18609 MicroRNA Expression in Kidney Development Comparing E14.5 and P1
GSE27418 miRNA profiling from T-ALL cells
Data table header descriptions ID Probe_Name Exiqon probe number
Human_Specific_Sequence oligonucleotides complementary to mature miRNA's registered in miRBase Release 8.1 as specific for known human microRNAs
Rat_Specific_Sequence oligonucleotides complementary to mature miRNA's registered in miRBase Release 8.1 as specific for known rat microRNAs
Mouse_Specific_Sequence oligonucleotides complementary to mature miRNA's registered in miRBase Release 8.1 as specific for known mouse microRNAs
miRNA_ID_LIST SPOT_ID
Data table ID Probe_Name Human_Specific_Sequence Rat_Specific_Sequence Mouse_Specific_Sequence miRNA_ID_LIST SPOT_ID 1
13138
Hy3
2
8370
No_known_hsa_target
rno-miR-9_MM2
mmu-miR-9_MM2
rno-miR-9_MM2, mmu-miR-9_MM2
3
10932
hsa-miR-128a
No known rno target
No known mmu target
hsa-miR-128a
4
10973
hsa-miR-181c
rno-miR-181c
mmu-miR-181c
hsa-miR-181c, rno-miR-181c, mmu-miR-181c
5
11009
hsa-miR-20b
rno-miR-20b-5p
mmu-miR-20b
hsa-miR-20b, rno-miR-20b-5p, mmu-miR-20b
6
11046
hsa-miR-302d
No known rno target
mmu-miR-302d
hsa-miR-302d, mmu-miR-302d
7
11084
hsa-miR-372
No known rno target
No known mmu target
hsa-miR-372
8
11122
hsa-miR-490
No known rno target
mmu-miR-490
hsa-miR-490, mmu-miR-490
9
11159
hsa-miR-518e
No known rno target
No known mmu target
hsa-miR-518e
10
11205
No_known_hsa_target
rno-miR-199a-5p_MM1
mmu-miR-199b*
rno-miR-199a-5p_MM1, mmu-miR-199b*
11
11245
No_known_hsa_target
No known rno target
mmu-miR-433*
mmu-miR-433*
12
12752
No_known_hsa_target
No known rno target
No known mmu target
No known hsa, rno or mmu target
13
1490
No_known_hsa_target
No known rno target
No known mmu target
No known hsa, rno or mmu target
14
13138
Hy3
15
13138
Hy3
16
7590
No_known_hsa_target
No known rno target
No known mmu target
No known hsa, rno or mmu target
17
10931
hsa-miR-127
rno-miR-127
mmu-miR-127
hsa-miR-127, rno-miR-127, mmu-miR-127
18
10972
hsa-miR-181b
rno-miR-181b
mmu-miR-181b
hsa-miR-181b, rno-miR-181b, mmu-miR-181b
19
11008
hsa-miR-20a
rno-miR-20a
mmu-miR-20a
hsa-miR-20a, rno-miR-20a, mmu-miR-20a
20
11045
hsa-miR-302c*
No known rno target
No known mmu target
hsa-miR-302c*
1600 127 Kbytes .Supplementary data files not provided
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