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Status
Public on Oct 08, 2008
Title
Agilent-012600 Arabidopsis 3 Oligo Microarray G4142A (Probe Name version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Arabidopsis thaliana
Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site at http://www.agilent.com/
Catalog number
G4142A
Description
The content on this microarray is derived from the ATH1 v.5 database of The Institute for Genomic Research (TIGR) and from the Arabidopsis MPSS database at the University of Delaware. Nearly 40,000 features represents 28,500 genes from TIGR and more than 10,000 unannotated transcripts from University of Delaware. This microarray will be useful for scientists studying gene activity associated with various plant organ functions, stages of growth, and biotic and abiotic stresses. *** The ID column includes the Agilent Probe Names. A different version of this platform with the Agilent Feature Extraction feature numbers in the ID column is assigned accession number GPL2871.
Submission date
Sep 09, 2008
Last update date
Oct 08, 2008
Organization
Agilent Technologies
E-mail(s)
cag_sales-na@agilent.com
Phone
877-424-4536
URL
http://www.agilent.com
Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (6)
GSM1320348 , GSM1320349 , GSM1320350 , GSM1320351 , GSM1320352 , GSM1320353
Series (1)
GSE54637
Transcription profiling of stigmas after pollination and after pollen coat adhesion
Relations
Alternative to
GPL2871
Data table header descriptions
ID
Agilent Probe Name
NAME
Name
CONTROL_TYPE
Control type
REFSEQ
RefSeqAccession
GB_ACC
GenBankAccession
UNIGENE_ID
UnigeneID
TIGR_ID
TIGRID
ACCESSION_STRING
Accession String
CHROMOSOMAL_LOCATION
Chromosomal Location
DESCRIPTION
Description
GO_ID
GoIDs
Data table
ID
NAME
CONTROL_TYPE
REFSEQ
GB_ACC
UNIGENE_ID
TIGR_ID
ACCESSION_STRING
CHROMOSOMAL_LOCATION
DESCRIPTION
GO_ID
A_84_P708402
AA041063
FALSE
AA041063
At.48081
AA041063
tc|AA041063
chr5:22596291-22596232
A_84_P703532
AA042283
FALSE
AA042283
gb|AA042283|gb|AV814002
chr2:17172686-17172627
24620 CD4-13 Arabidopsis thaliana cDNA clone E5H9T7, mRNA sequence [AA042283]
A_84_P722641
AA042352
FALSE
AA042352
gb|AA042352|gb|AV557457
chr4:017281390-017281449
24689 CD4-13 Arabidopsis thaliana cDNA clone E6G11T7, mRNA sequence [AA042352]
A_84_P725907
AA042383
FALSE
AA042383
gb|AA042383|gb|AV522871
chr3:7544754-7544813
24790 CD4-16 Arabidopsis thaliana cDNA clone H8D2T7, mRNA sequence [AA042383]
A_84_P724696
AA042391
FALSE
AA042391
gb|AA042391|gb|AV546325
chr2:9371076-9371135
24798 CD4-16 Arabidopsis thaliana cDNA clone H8E8T7, mRNA sequence [AA042391]
A_84_P71694
AA394485
FALSE
AK176851
At.43873
AA394485
tc|AA394485|gb|AK176851
chr3:7162103-7162162
Arabidopsis thaliana mRNA, complete cds, clone: RAFL25-40-P17 [AK176851]
A_84_P724322
AA394669
FALSE
AA394669
gb|AA394669
chr1:23203625-23203566
26466 Lambda-PRL2 Arabidopsis thaliana cDNA clone 156G17XP 3', mRNA sequence [AA394669]
A_84_P11137
AA605373
FALSE
AA605373
gb|AA605373
chr5:6018669-6018728
30409 Lambda-PRL2 Arabidopsis thaliana cDNA clone 185O8XP 3', mRNA sequence [AA605373]
A_84_P720067
AA712521
FALSE
AA712521
gb|AA712521
32236 Lambda-PRL2 Arabidopsis thaliana cDNA clone 198O8T7, mRNA sequence [AA712521]
A_84_P716844
AA713092
FALSE
AA713092
AA713092
tc|AA713092
chr4:14605548-14605489
A_84_P723246
AF016100
FALSE
AF016100
At.24621
gb|AF016100
chr1:23087889-23087948
Arabidopsis thaliana ACC oxidase (ACO2) mRNA, complete cds [AF016100]
A_84_P738579
AF083726
FALSE
AF083726
At.18976
gb|AF083726|gb|AU226469|gb|BP572448|gb|BP574282
chr1:10788510-10788569
Arabidopsis thaliana clone sps358 unknown mRNA [AF083726]
A_84_P714883
AI099671
FALSE
AI099671
gb|AI099671
chr2:19434884-19434825
33824 CD4-13 Arabidopsis thaliana cDNA clone E1H7RP, mRNA sequence [AI099671]
A_84_P281020
AI099928
FALSE
AI099928
gb|AI099928
chr5:010633701-010633760
34081 Lambda-PRL2 Arabidopsis thaliana cDNA clone 137L9XP 3', mRNA sequence [AI099928]
A_84_P704232
AI992501
FALSE
AI992501
gb|AI992501
chr3:22359053-22359112
701558012 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA clone 701558012, mRNA sequence [AI992501]
A_84_P740110
AI992501
FALSE
AI992501
gb|AI992501|gb|AU226174
chr3:22358747-22358805
701558012 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA clone 701558012, mRNA sequence [AI992501]
A_84_P736789
AI992632
FALSE
AI992632
gb|AI992632
chr5:5987873-5987458
701558545 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA clone 701558545, mRNA sequence [AI992632]
A_84_P727695
AI994141
FALSE
AI994141
gb|AI994141|gb|BP656230
chr5:16467844-16467785
701499377 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA clone 701499377, mRNA sequence [AI994141]
A_84_P709422
AI994208
FALSE
AI994208
gb|AI994208|gb|T20456
chr5:9784085-9784026
701500273 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA clone 701500273, mRNA sequence [AI994208]
A_84_P724662
AI994326
FALSE
AI994326
gb|AI994326|gb|BP600600|gb|AV793918|gb|BP636131
chr3:022808966-022808907
701502836 A. thaliana, Ohio State clone set Arabidopsis thaliana cDNA clone 701502836, mRNA sequence [AI994326]
Total number of rows: 37494 Table truncated, full table size 11728 Kbytes .
Supplementary data files not provided