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Platform GPL9285 Query DataSets for GPL9285
Status Public on Sep 24, 2009
Title Trypanosoma brucei Strain 927 Oligonucleotide Tiling Array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Trypanosoma brucei brucei TREU927
Manufacturer NimbleGen
Manufacture protocol High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
 
Description 60mer probes were designed to known coding regions of Trypanosoma brucei strain 927, Approximately 8 probes per gene were designed to each of the 8562 protein coding genes, and 3 probes were designed to each RNA gene. Each probe was placed on the chip in triplicate. Remaining space on the array was fillied with 50mer probes spaced evenly through unnannotated regions of the genome, though these probes were not considered in the final analysis. Only one copy of each unnannotated region probe was placed on each chip.

The Platform data table reflects a condensed representation of the array's replicate features. The full array layout representing all of the individual features (and probe sequences) is linked as a supplementary file at the foot of this record.

Native NimbleGen files (ndf, ngd) are also linked as supplementary files.
 
Submission date Sep 24, 2009
Last update date Sep 24, 2009
Contact name Dhileep Sivam
Organization name Seattle Biomedical Research Institute
Department Bioinformatics Core
Lab Myler Lab
Street address 307 Westlake Ave N
City Seattle
State/province WA
ZIP/Postal code 98109
Country USA
 
Samples (15) GSM456162, GSM456163, GSM456164, GSM456165, GSM456166, GSM456167 
Series (1)
GSE18049 Widespread variation in transcript abundance within and across developmental stages of Trypanosoma brucei

Data table header descriptions
ID
tritrypdb_id The TritrypDB identifier (tritrypdb.org)
gid
gid_list
residues nucleotide sequence of each gene
description
ORF Entrez Gene locus tag

Data table
ID tritrypdb_id gid gid_list residues description ORF
Tb04.24M18.150 apidb|Tb04.24M18.150 ATGTGGCATGCTGATAATGCCATTACATGGAGGCTCATTAGAAAAGCCCGGAGGGAAATTCAAGATCTCCACTCTATAGCACTACATCCAGCTATCCAAGAGGTGCTAGGGAGCAGTACCAGCAAGTCCTCCCGCGTCTTGATCGTTCCAGCCACCACACCAGCAATAAAAGACTCTGCCCGCGATGTAAAAGTGAGCGTGTTGGGCGATGGCCTGCTCCCTGTTGATCCATTTGAGTGGCGGGGTGATCGGGCGCGATGTGGTGTGGAGGAGGCGTCGGCGCTCTGCCGGGCCTTTTACGGGAAGAAGTACCACCGCGGTAACGTTCCTCGCCTCTTGAGAGAGGTGGAACAGGACGCGCTAGCGAAGCGGGCGGCCATACTCGCGAGAGATCTAAGGGATGCTGAGCATTTTTTGGCTGTTCTTCCAATTATCGATGGGGAAGACCATGCGCATACAGAGAGCGCGTTCTCTCAATTGCCTAAGTAA hypothetical protein conserved Tb04.24M18.150
Tb04.3I12.100 apidb|Tb04.3I12.100 ATGCTTGCGAATCCATCTTCCTGCGAGCGCATCGGCGGATTTGTGTCTGCGCGTCTTTGTGGAAGGTTGTTTGTTTTTTGTTTATGTTTGAAGTCGAGTTTGCAAATAAGCAAGAGAAGGGGATTTCTTTCTTCTTTTTTTTTTTTTGCGCCGCGCGGAGCGTTCCCTCCCCTCTTCCTCCTCCAAAAAAAGAATGAAAAGAAGGAAGGAAGGGTTGTGCCGTACGGCTGTACCAATTGGAGGCGCGGAAGCAATGAGAAGAAAATTCCACGCTCGTTTCCCCTCCTCCTCCTTCTCTTCCTCCAATTTTTCCTTTTTCTTGCGCATGAAACACGTTTTCCTTTTGTTACTGTTGTATTGCTGCTCGTTCTTTTCTGTCTTTGTTCCTATTTTCGTCTGTTTTTCCCCCCTCCCCTTCTCTCTTTTTTTTTTCTTTTACGTTTTGAGTCCTTTTAA hypothetical protein Tb04.3I12.100
Tb05.28F8.200 apidb|Tb05.28F8.200 ATGTGCGTGTATGTGCTAGTTGCGGGTTATTTGTTAGAGAGGAACTATATTATTTATATTATTAAAATGTTACCCTCAGTCCTCATCAAGGCTGAGGGATGTAGTGGACGTATCCTTGTGTGTGCTTGTGTCTGTTTGTTTTTATATTTTTATATCGTCCTAGTGAATTTGGAGGGGTGCAATGAGGAAAGAGAAGGGCGTGTGCGCTGCATGCGTGTTGAAATGAGTGTCGGGTTTCTCCAACTGTCTCTTTACCCACACCCATTTACTCACCTCTGCACACTTTCCTGCTTGGTTTCTTCCTTTTCCTTCATCTTTCTATGTTGCCGTTTTCTTCTATTTGGTCATCCCTTTTTATCCCACTTTGATACCACTTCGACGATCCCTGCTAAGATGGGGCTATTCACGGTGAAGATATCACTTTGCTTTCCCGCCTCCCACCCCTGTTATCACTGCCTTTTCGGCCACAACAGGAATAATAGTAGAAAATATTGTTGGTCCTTGCTATAG hypothetical protein Tb05.28F8.200
Tb05.30F7.410 apidb|Tb05.30F7.410 ATGCGGGAAAATGCAACTGCAGAAATATGCGAGAAGAGGCTCACAAAGATGTCAGAGGCTCTGAAGACAGGATTTCCAGGAGTGACGAACTGCCACCCCAAACCATTTACCATGGGGGAGCTGAAGTTGGCGCTGGATGAATTTACGCACAGGGACCGTGGTTGCAGAAGCATAGCAGGGGAAAGGAAGCAATGCCCAGTGGGGATGCGCAATCACCGTATAAAACGTGTCAAAAATACCGAAACAGTGGAAGAAGGACGTTACAATACCAACCTTGCAGCCGAGCGATCCTGCAACACAGGTGGCATCACCCCGCCTGGCGATCCTTATGGACGCCCTCGGAAAGTAAGTGGAAAGAGCTGCTATCAGAAGGTTGAAAGTTCGCCCGGGAAACTTACTGCAGCCACAGAAACCAGGGCCCAGGCACCACTCCCCAGCGGCATCTATCTAGTGCGGGAAACCGCGGTAACAAAAAGGAAAGGAAGTACCGTAGGCATTTGTGTATTATGA hypothetical protein Tb05.30F7.410
Tb06.3A7.270 apidb|Tb06.3A7.270 ATGTTGTACTATGCTTTGCAGTTTGCCTGCATCGAGGATGCGATACTTATCGCCTGCGCAATGACTGTTCCGGCGTTACTTCTCTATCCACGCGTGTCTGTCCAGGTTGGGGATTCCAAAAGCTGCGAAGGTGCACCAGCAGCACAATACTTGCAGTCACTTCTGATTCAGCGGAGTACAGCTTCTAAAATCGGAGAGAGGGGCAAAAGCACCAGTGGGCACACTCTGAGTGAACCACTCATGCTGCTTTCAATCCTTTATGAATGGTACGCATGTACTAGCAGTGCGGATGTGGTGGCCTTTTTTCGAAAATTTCGCGTGAACGGTAGGGCACTTCGCACTGTAGATAGCAGCGTGGCACAGTGCGCGTTACGCCTGTGGAGACTTGTCACACAGGGTTCCGACTCACATGAAACTGTGAATAAGGAAAAAGCTGTCACTAGTGGTGTGGGGGGTGGCGATAAAGATGACGTATTTGCGCTATATGGTGAGCATGACAGGGTGGAACGCCGCCCCAGCGCCTCACTTATTAAGCAGCTTGTGCTCTCCACCTTCCCTGAATCGTACCGTGTTCTACTTGCCAATTCGTTGCTGCGGCTTCACCGTTGCGCGCTTGAGCATTCCGCCCACCGTCCTTCATCACAGCACCGGACTATGACACAATGGTATACACAAGATGAACAACTTATCCGAAAACTTCAACCGCAATTGCCCAGGGCTCCAAAGCAGAATCAGAGGTCCAAGAAACCGCTGCTTACATTTGGACACGTACAAGACCGGCTTTGCGCAGCTTTCGTAGCCGCATTTGCAAGGAACACCATGCGTGGCGAGGATGCATCCCACCGTGCACACCAGAGGCGGATGCTGCGTAACCTTGGTGCCCTGCAGGAGGATGCAGACCGTACATGCTCCTTTTCGGTGGAGCTACACAGCGACCAGCGGCATCAGCAGAGTTTACTTGAACGCCTGACACCAGAGGTGCTGCGCGACGTCATTACGCCATATCTAGCCGATACCAATGTTCAACAGATTGAACTTTTTTCCACGAGGCGTTCAGGTGTCGTTCGATTTGGTAGCGAGGTTAATGGGTCTGTGGATGGAGACAGAAGAGGCGGCAACTCAGGTAAGGAAGAGGACCGGTTGTTATCGGCGGTCGCACTGCCTTGTGACCCCGCAGGGTTAATGGAAGCGGAAAAGGGAAGAAATTTGGCTGCGGTTGTATTAGCTCCTATTGGAATAAGTCTTTTGGTGTCAATTCAGAATATACTAACACGGCTGGTGGCAATGCTGCCTCCCACATCACCACCGGCGTCATCAGCCGTACGTTTACCAGGTGAGCAGGACAGAAACGATGGGGAGACGGAATCGATTCGGCGGGCAGAGGCTCATGAAAAAGTAGCTTCTTTGGATCGTTCACTTCCAGTTCCGGGTGTAAGGACGGTCAACCGTACGTTTAGTCTCCGCTTTACAGAAACTGAGGGAGATTCCTCTGCTGCATCTGATACCTGTGTAACATGGCACGATAGCTACGGTCGGGAGCATTCCCTTCTTCTTAGTGACGCACGGCGTATGGGCTATGAAGAATTTTTTCCCAAACCGATTGCGGCTGCAGCCGCCGATGCTGACCATGAGGACTGTAGCATCTGCCGTTCAACTGGTAACGGTGTCATCTTGTCAGGCGAGCCTGTACCTGCGCCCGGTGTTGATGAAGATGTGAGTAGCAGTGGAGTGAATAGTGATGGTAGTGACGAACAACACGCACTGCTAAGCATACATCGTGTGACCTTCACTGGAGCGGTTCAATGGAAGGTAACTTTGCCAACTGTGAGGTCCTCTCAACACGAGTACCACAGCTGTGAAACGGAGGAGGGGGAAACAGCACCTTGTAATAAGGATTATTACTGCTATGTGTGCCACAATTTGTGGTTTCGGGAAAAAAGCTTCCATCATCACTGTCGGAGCGTAACCCACCTTACTCGACTTTCCTTTGCTGTGCAGTTCGGTATGCGGCGTGAGTGGGTGGGATCTTTCTGTAGCGGCACGTTATCTGACCTTCTACTACGTAAGAGGGGGACTAATAGTGTCAGTAGCATCAGTCGTAGCGATGTGGCGGTTGAACTTAGATCCTGTAATGTATCCCCCTTGTCGTTTCTTAACGCTCTACAATGGCGACCACGTGGTGAAGGGGGGACAGCGATGCTGCCGATGGCCGTTGCGGGCACGCTTATAGGAAATGCTCCCTCCTACACAGTAACTCGCGCAGCGCCAATAAAAGATAGTGGTATGACGCTGCAAGCGTTACATGTCTGGGTTTTGGACACTGAGCGCCCTGGCGCCTCCACTGAACCCGCAGGTAGTGAATTGCCGCCCTCGCTGTTTGTTCTCGCAGGATATCTTGCCGCTGCCTCCACTGGTTTTGACGCCGCTCTACTGACGAACACCGCGCATACACGAGCGCATGCAGTGATGCTACATGATTGGGGAGTGTGGCGCTTTCCAACTCCATTGAGTGTGCAGAAACTGAAGAGTGTTATGAGGGTTTATGCCGGAAAGCCGTGGCGAGGCGTACCCGTCGATGCTGATGATGAGTGCGAGGCAGGCGGCACGGCAACCGATCAATCTAGCGAAAGTGGGAACCGATGTCGTAAAGACGATGCGGGAGGTGCTTGTGAGGAGGAAAGTTTGCATTGGTGCGTTGTGTCCGATGTGTGCCCGCAGTGTACGTACAGTGGCAGCGGCGGGAAGGGGCGGCAAACGAGGAGGGGAATTCTAAAGGTAGTGTTGGACGACGACGCACCATCTGTGGATGAGGTAGTTCAGAGTACACTGCTGATTGTGTTGCATGAGTACCAAAACTCTTTGCGAAATGTTGTGAGTTTCGCCGATTACATTCAACGGGTGGTCGCAAAACTTAACGCGTGGTCTAACGCTCAACAACCACAATTGAGACCTCCAGCGGCAGCGGCGGCGGTGGGACATTGCCCAGGAGCGGAATTGTTAGCGAGGCTCGTGGCTTCTCGCCGCGGCCAGTCGATAGAAAATCTACTCCGTGATATCGGCTGCCAGTTTCTCTCCCCACCCAGCACTCTGGTGGCCATGGGGGACGTCGATGGGACAATTATACCAACAAAAGGGGTGCCAAGAGTTAACACCGGCGGAACGAATGAAAAACTCTTTCTCATTCCCACCGTACTACCCAGTTATTTGCCTTCACCGAACCTCGCTGAGTTGTTACGGCGCCATCGAGTTGACATACGCAACTTTCATGCGCATGCTGCGTGCGATTTCAACGCCACTTCGCAGGTGGGAGGAGCCGCTGAGCCTGAGAAAGGCACACTTTCAAGATCCCTACAGGTGACAAAAGGTGTTAACACGAAGCAAGGGCATGGGCCCGATGTGCTTTTCTGA hypothetical protein conserved Tb06.3A7.270
Tb06.3A7.960 apidb|Tb06.3A7.960 ATGGCGACATTCACTTGCGGAGTGACGCTACTGCTTTTTTCTTTCCATTTCTTGGCAATTCAGTCAGAGGCAATTCCGCACATATGTGTTAATGCAGCTAATTATAGCCATACCCAGTTTGAAGAGTGTCTTACTCACATGTGTGACCTAAGCGAGGAGTTAAGTGCTTTTAAACGTACCGCGGTTTCCCTTAAGCGGCAAGCTACGGGAGACGCCGAAACTTCGAAATTGGCGCTGCAGTATATGGAAGAGGCACTTGAAAAGGTCCTCCACGTGACGCAGGGTGTGAAGGAAGGTAACAAAACGATCGGAACGGCCGCTGCAGTCAAGAAGTCCGTGATTGAGGCAAAAATTGCGTCAGACATAGCGGATGAAGAAGCTTCCAAAGTGGAGAGGAAATTAGATAAGGCTACGAGGGACGCAGGAAATGCAGAGAAAAACCTTCAGCGCATATTGATATACACCGCTAGAAAAGCTTGTTCGTCTGAGGGTATATCCTCTCAAGATGAGGAAGTAAAGGAGGCTCAGTGCAACGTAAGTACGGAGATCGTCTACAGCTGCACCCGCAGGCCGTTAAAGATAAAGTCTGATACGTTACGTAAGACGTATGAAAGGCTTAAAAGTTTCACTCGGACGCCGAACAAGACAATAAACGAGCATTTACCGAAATGCCATATGTGGACGGAATTACTCGAGCCGGCAGTGGCGAGCCTGACTGATATGGAAAAATCGGCGTCTGTTGCTCGTGCGTATAGAAACCAGGTAATCAAAGCGAGAGGGGAAGCGCAGCAAGCGGCATGGACAGTCGGCGTTACTGTTCAGGATGTGGATGGTTTGGATGAAGTGTCGGAGGAGGACGACTTTGCCCTTGCACCCGTGGTGCTCGTCGCGGTGCTTATTGTTGGCGCTGTGTTAATTGACCAGCACCCATAG hypothetical protein Tb06.3A7.960
Tb07.26A24.210 apidb|Tb07.26A24.210 ATGCGGGCGTCATTCGAAGCTGGTTCTGGCTACCAATGCCGCACTGGGGAAACTCTTGTTTTGACACATCTTACTCCTTCCGTTCCTCCAACTTGCCCTTTCGTTCAGCTTTGTAAACATCTGTTTCCTTCACGTTTCATTGTTGTAATCACTTCGGTATCTCAATATTTCGACCTTTTGATCTTTCCCTCCCTTCCCCCTCCCCCACTTCTCTGTCATTCGGTGGTCCCCACGTTTGAGCGCAACATCTTACGAGAAGTGGTTTACTCTTCCTCCTTGTCGAAGCTACACGTGCACTTGTGGAAGAGCATATTGAAACGACGAAGAAACGCTAAAAGGAGGGAAGGGGTAAAGCAAGAAAGAGTTTTAGAGGTGCGCGAACAGAAAGTGAATAGGGTTATATATATATATATATATTTGTTTATTTATTTGTACATTTATAGAGAGGCATAG hypothetical protein Tb07.26A24.210
Tb09.142.0100 apidb|Tb09.142.0100 GI:70830721 GI:71743852 ATGCTTCTACTACTCGCTTTAACGGCTACAATAATAAGAAATGACGCTCAAGCGCAAATACACGAAGCACCAAAAATTATAGCCTCAGCATGCGACTCAACGCGACAAACAGAACACGTGTTAACACAAATCAAGAGCAAAATTGAAACAGCATTTCAACAGATAGTTCTAGGTAAAAAAACATCCGCGAAATTGTCAGTGGCGGCGGCAGCGAGCACAGGGGAGAAGGCAGTAGCTTACGCGGCACTAGCAGCAAGCGCAGCAGTAAAACTACAGGCCGCGGAACAAAACCTGCAAAGCAATCTGGACGCCCTCCTCAAAGGCGCGGCAGCGGCCGCCGAACTCACGGCCACAGAAGAACTTGTATCAGAGGCAGCGGACCTTTCTTTAGAAGCAAGGTCAGGGGCGCGGACATCAACTGCATCGGGGACGCAGGGCGGTCTACCACTGAGGTTCGCAAGGTTCGGCGGTGGGAAGAGCAAATGCGACACAGCCAAGGAGGCAGCCGATCAGAGAAAAGCGGCTCCGGGAACCAAAGGCGGCGACAAAATCTCGTTCGCCCACCTGCAAAACCGACCAAAAATAGGCAACGACAAAAAGCTAGCTGCACTGTGCGGCGACGACAATACACCGCCTAACAACTGCGACGGAAGCGCGGACGCCGACCTGACCTACTTCGAAATAACAACTGGGACCCTACTCACAGAAAAGATGAAGCAGTACAACAAAGGACCCCAACCCACAGATGGATACACACCAGACACGCCGGAGCCGACAGCCTTACTGCCGAGGGAAACTTACGTAACTGGCCGGCTCAACATTATAAAGCAAGCAGGACATGCGTACGACAGCATAACCTTTACAGCAGACAGCTTAAAAAACTCTGCGCTGGTGACGGACGGCACAACACAAGCTCTGCTAGAAACGACATTGCTCACACAAAAGGAGCGCGAACAAACCGATATACGACAAAATAAATTAGAGGAAATAACGGCCCGCTTGTATGGCAAAGCGGGCACAGACGTCAAGGCGCGCATATGGGAGCCAATTGAAATAATACCGATACAAGCGGAAGCTACAGAAGACAACAAAGCCACAGAGCTAAAGCACCTCACAGACATAGGCAAACTCAGACGGGCAGCAGCTTTTTACTTAGCCAAGCAAGCCACAAAAGCCGAAACTGCAGCAGTGCAGAAGGCAACGGAATCCACGGAAAAAACAGAGAGAGCAAAAACAACAGAAAATAGGAAATATGGGGATAAAAAAGATGAGGTTTGCAAAGCCACTGACGAAAAAGATTGCGACAAAAACAAATGCGAATGGAATAAGGAAAAGAATGAGTGCAAAGTTAAAGAAAGTGCTTTTATTATTTCTGTATCAATTAAGGCGATTCTTCTGCTCAAATATTTTGGTTTTAGTGTGAAATATTTAATATTTTTTCAAATAAACTCTATAAAATTGATAGGGTTTTTTGATTTTGAGAGAATCTTATATTTTGAAAGATTATGGTAA variant surface glycoprotein (VSG atypical) putative Tb09.142.0100
Tb09.142.0230 apidb|Tb09.142.0230 GI:70830723 GI:71743856 ATGAAAGCCAGACAAATAATTACTCACCTGGCGGTGCTGTTGCTATTAGTGACCCCGCAGGCACGGGCAGCGGCACCGGCAGATGGCGACAACTTAGCGACGCTGGCGTACTTGTGCCCCGCCCTTCAGCTAGCGGACGGCGACATAACATTGCACCCCGAACAAAGCAATCTAGATGGCAGCCTACAAGACCTGCTAGCGCTAAACATGTCACTAGCAGACGCCGCCTGGGCAGCTCAATTCAAGGCCTCACCGCCAGGTGCAACGCCAGTAGCAGCAACCGAGCAGCAGCAGAAGCAACAAGCCGGCACGCCAGAACAAATTGCTGCCTGGACTGCCGCCAAGGCCAATGTAGATAACACCGCCAAATTCAAAGATGTACTCGCAAAATACGGTTACACTCAAGAAAACGCGTCAAAGCTAATTCCTTTGAAAGGACCAATCGCACAGTACGCTGACGCGGCGTTCGGCATACAACAAGCGACAAAGACAAGCGAAAAAGACGACAAAACAGATTCAGACCTCAAAGCTTTGATAAAAACAGCAATCTACGGCCATGACGGCGGCTACGACGCCACAAAAAAGGAAGAAATGGGGCTACAAGGGACACAAAACCGGGAAAACCACTGTACAGCACAAAGTAACAGCAACCCAATTCAAACGATTTCGACTATGGTCGCTTGTCTGTGTGCCGTAAAGGACGACATGGTGTCGGGAAAAGCACCGTGCGGGCCGCACGCAGACGCAACGCTAAAATGGCAAGCTGACGGGCCGCCACAGACGCCACTATGGCCGAAGATCCGCTCTATCTGCCCAAAAGCCGACGGCGGAACTGTAACAGCCGACAGAATAGCAGCAGCAATAGCAGCAGCAAAGATGGCTTTCTTCAGCAAAGGCAACGATCTTTATGTCGGCAAGTTCGACATGGCCGGCTGCGACGGCAGCAACAATGGTGCCTGTATAAAGTACACAGACCAGGCGTCGAACTCAGTACCCAGCTTCAAGCAGGCCGCATGGATAGACAAACTTGAAACTGTAGAGACATCATTGCGAACGCGCCAGCAGAACCAGGACATCCAAAAGCAGGCGCAGACAAAAATAGAAACGCTCAAGCAGCTGGTCAAAGCAGCCGCCAAACACGCAGAAAAACTTACAGCGCCAACGACGCAGCACCATAGCAACCCAAAACTAGCCACCACAAACGACAAAAATAGCCAAGCTCAGAAAACAGCAGATTGCTCAAAACTTGAAAAAGCGGAGTGCAAGCCCGATGTGGGATGCAGATATAACGAAACAACTAACAAATGCGAAGAAGATCCAAAAAGTCCAGTTGTGCAGGCAAACAAAGAAGCTAAAGGAGGAGCAACAAACTCTGAAGGTAAGAATTACTCTGGCAAGAAAACTGAGGGCGAATGTAAAGATAGCTGCAAATGGGATGGAAAAGAATGCAAAGATTCCATTTTCCTTTTCCGTAAAAAATTTTTCCTGATTGTTTTTGCATTTTTGGTCTTGCTGTTTTAA variant surface glycoprotein (VSG atypical) putative Tb09.142.0230
Tb09.142.0240 apidb|Tb09.142.0240 GI:70830724 GI:71743858 ATGACGGCACCAGTGTTGGGGGCTACCATGCTAACCATTGCGCTCCACCTCGTCACCTCTGGAAGCCTGGCAACGATACCGGAAGGAGCAAACAAGCACGAGCACGCGGTGTTGTGCGAAGTACTAGCGATTGTAGATGCCGACCTCGACATACCCCCACAAGAAAGTGTCGACGAGGCAAGCTACAACAAAATACGTAACCTCAATTTTTCGACATCGACGACCGACTGGCGGAAGACGTTCTACTCAGACGACGCTCTAACGAAACCCCACCCAGAGGCCCAGCCGGCGCACAAGAAAATAGCAGACTACGCCAAATACTGGCCAGACTGGCATGGGGCGGCCACAGCATTAGCAGCAACGAAGAAACCAGACGAGGTTGAGAAAGCCAAACTGGACGAGCTAACACACCAGAGCCGGCAGATAGCACACGCCCGCGTACGGGCTATAGCAGAAACAGCTCGGGCGGCTAAAGAAAAGGCGCTACAAACAGCCGGCGAAGCCGAAGTAATCGACAAGGCGGAGGAGCTGAAAGCACTGAAAACAGTTTTTTTCGGAGCAGATTCCGCAGCGGCGGCGACGGTAACGACAACAAATGCGTTCGGCACGGGAACAATCAACGCCCGGCAAACAGCATGCGAGGCAGACCCAGCAGATGGCAAGGCGAAAACTCTAGTCGCACAGCTAATGTGCGTATGCACAAAAGCGACTCAAGGGTCGGCCCTCAGCAAAGCATGCACAGCGGCAGCAGACGGCAGCCAGGGATGGAACAGCGGTTCGGGGTCTCCCGCTGACACTGACGCCAGCGCAGTCGCCAAAACGTGTGCAAACACCGGAGAGAGCAAGATAACCGCCACGCGCTTGCGACAAGCAATAACCAACGTCGCAAAACTAGTACACCTAACAAGCGACGGTACCGGCTACATCGGCGTATACCAAGCAACAGGTTGCACCGGGGCCGACAACGCCGGCATGTGCGTCAAGATACCAAACTATAAATCGAATCCTACAGACGGGATTAAAAAGCTACAGTGGACATCAACCCTGGAAAACCTCGCTAACAAACTAGAAGCTAGAACCAGGTACAACACCATTATCTCTAAACTAAACGAACAGCTACGATCCAGCTCAGAGCAAGCCGAAGAAACTATTCAACTAACAAAGCGAGAAGAAGCCGCTAGATCAACAGCCACCAAAGAACAAACTCAAAAGTCCACCACAGCGACTCAGGCGCAAAACACCCTCATTAATGAGTGCGAAAAAATAACCAAAGCAGCGCAATGCAAGGAAAAAAAGCCGGCATGCGAATGGCAAAACAAAGCCGCCGAAGATGGCCCCCACTGCAAATTGAATGCGACGAATGTAGAACAACAAGCAACTCAAGCAGGAACAGGAGATGGAGCTGCAGCAACAACAACAGATAAGTGTGGTGCGGCAAAAACTCCTGAGGAATGTGCTGCAGTAAAGGGTGAAATTCCGAAAGATAAAAAAGCTGTTTGTGGTTGGATTGAAGGCAAATGTCAGGATTCCAGTATTATTATCAATAAGAAATTCGCCCTCAGCGTGGTTTCTGCTGCTTTTATGGCCTTGCTTTTCTAA variant surface glycoprotein (VSG) putative Tb09.142.0240
Tb09.142.0310 apidb|Tb09.142.0310 GI:70830725 GI:71743860 ATGAAGGTTATTGTTGAGCGATGCCTAGCTTTCTCACTTTTTGTAATTTGCATTGGTGGTGCAGAGGAAGAGGGTCCATGCACGCTGGTCGACGATTATTACAAAAAGAATTTGAAAGAGACTTTATGTTATCTTCGTTGTCTCTCGAATGCGTTGAATAAATTATACACTGATGGCGAGAGGAAAATGCTTGTGAATGAGGAAGTATACGCAAATGCATCTCGTATACTGGATGACATGGAAGGTAAAACAGGTGAAAGCACAAAATATTTGAGTGTTGTAAGTAGTGCAATGGGAGACCAACGTAAGAAAATGGAAAAGCTTATATCTTATGGAAATGAAATGGGAGACCTTGTAGCGAAAGTAGGTGGATTATTTTCTGAAGTTAATGAGAGTGTGAGGGCAGTGAGGAAATATTTACCTGATGCTCTCACAACAGCAAATAAATACTATGCATCTATTGCTGAGATAACACGGACAGCTTGGGATGATGTTAAGGCTGTAGAAGCAGGAGGCACTGCTAAATGTGAAGAACGAACCTTTCAAAGGGTTAAGGGGTTGTTAACACCGTGTGCTGACCAAACATGCCCTCTGGCAAAAACTGTAAACGAGAGCACTCTCAAAACGTATAAGGACGGTTGTCTTGCAGTAACAGTACAGAATGGTTCTGTAAGGGAGTGCTTCAACCTTCCAAGGGATAATTTGTATAGGAGTGGTGCAGTTAAGAACTCAAATGATGCATTGGAATGGAAAGAAGTTCGAGATCGTGGAGCTTCTTTTCAACTTAAAGTCAAGGTGCAAGAAATATTTGGCCCCCTCATCACACCTTTTGCTGCCGGACAGCCACCTTCCATGCTTCTTGGAATGGTGTCAAATATCACCTCTCTTCACTCCCAATTTAACAAGGTGCATAACAACTTCACGTCGCTGCTGTTCGACATTGATGTTGCTGGTAATGTTACCACCGCTAATTCTTCCATCTGA expression site-associated gene (ESAG) proteinexpression site-associated gene 1 (ESAG1) protein Tb09.142.0310
Tb09.142.0320 apidb|Tb09.142.0320 GI:70830726 GI:71743862 ATGTGGTGTGCCGCGCCAAGGCAGGAGAGTCCAACAACGAGCCTGGTAAAGGGGACTGGAATCGGCTGTATGACCTTAGGGAGTGCTGTAGCTACAGAAGGCATGATATTTTTAATTGAGGCGATTGAAGTGTGTAGTAACAGGAAAGGAGGGATCATCGGGAAATTTTTCTGTTCCTGCGCAGCGCAGGAAGTGGAGGAAGGAACGAGAAAGGTGGAGAAGAGACACAATTTATATCAAGTATGGGCAGGTAGTTTTTTCAAGGGATGCTGTCAACAACCCCTGAGCACAAACATCACTATTTCCAACACTGGGCTGAGAGGGAACAGAAACAATTCCTGA hypothetical protein Tb09.142.0320
Tb09.142.0350 apidb|Tb09.142.0350 GI:70830727 GI:71743864 ATGTATAATTTGTACATTTACTTTGTGCGAAAAAGGGTAGGCCCCGTAATACATAGTGGACCAAAACACTGCTCTGAATCGTTGCTTGTGCTCACAGCGCAACAAAGTCAAATGGGTATGTTGGTTCAATGCGAAGCACAACAATGCGGCACTAACGGAAAAATAGGTGCAGATGCCGGCACAACTACACGCAGTTGCGCAGTGAAATACAGGGGCGGTGGTTTCACATCGAGGTCAGAAGAATTCCTAGCGATACAGCAGGAGCTGATACACGGCAGTACGGTGCCCCCAAGATACGTCAACAACGTTAAAGGAATGTGTGATACCGGTGAAAAGACAGGCAATGGAATACGAAGCTGCGGAACAACGACATGTTCAACTCTCCCAGGAAATGAGAGGAATACAATGGCATGTTCACTACAACGCATACGCTGTAGCTTCTTAACAGAATTGTTGGGAGAGTTAACTTCATGCGCAGGGGCCCGATGTTACGGAAAAAAAACTACCAAGTGTAGCACTGGTGGCGACGACAAGCACTTTCGGTTAGTCACACAGGGATAA hypothetical protein Tb09.142.0350
Tb09.142.0360 apidb|Tb09.142.0360 GI:70830728 GI:71743866 ATGTGTCGTCGGAATCCCTTCCACAGTAACACGATAACAGGGAATACCTCAAGGTTCCTATCCTCTCCTCCATTCGGTTGCCACCAAACCCTAAAATCAGGAATATCCTTGAGGAAGTATCCCATTCAGAATGCGTCCTTTATTATCTCCATAATAAGTTGTATTCGCTTTTGTAGTGAGACCTGTTTATGGATAAAATTTCCAGAAGCGCCTAGTTGTTGTTGTTGTTTTCGCTCCGTCGTGGAACAGTGCGAAGTTGTACGGTGGCACCTGCGAAAGCGATCAGTTATTCGTGTCCGCTGGTTCGTTGATGATTGTGTCGCCACAGAAACCTTACAATTTCATACTATCTCTCTTTATCCCGATTGCTACAAACCACTCTCTTCTGACTGTCATTCAGATAAACTCGGCGCAACACATCACTTTTTTTTGTGTACAAAATCGCGCTTCGACAACATTTTTGTCCACCATATGTGTTACGGGATCATCGCGTATTTGATACCCAGCATTATTCCCACTTGCAAAGTCGCGAATGGTCTTCTGGTATTAGCTCAACTGGCCCTTACAACTTTCCCTTTCATACTGTTTCACGTTGTCAATGGCTTTCCGTTCCATCCACATAACTGTCATCACAGCTGCTAA hypothetical protein conserved Tb09.142.0360
Tb09.142.0370 apidb|Tb09.142.0370 GI:70830729 GI:71743868 ATGCTTAAAATTGCAGCAGTCATTTTGTTGACGCTGAGGACGTGTACGCCCAGTGTCGTCTTCACACGACAACCAGACGTGCAGGTCACATATGGAGACGAAGGGCCGAGAGAGTACTTCGCTCCCACAGCAGAACAGTTGGCACGGGGAAAGATAACTCCAAAACACAAAACTCAGCCGATGGTGGGACCTTTGACCCATGGTAGTATACCCGATGAAAGGAGCGAAGGAGGTGAAAGTGAGAAAAAAAGTAGTGAAAAAGTCAGCCCTAAGGCAAGCGATGTTGAGAACGAGGATGGTACAGTGGTTGAAGTATTACACCAACCAGAGGCGAGTGGGGCACCTGTTGTTGCAGGTGAGGAAAGCACATATATAGCAGCACAAAAGTCAAAAAGAACAAAAAAACAATAG hypothetical protein conserved Tb09.142.0370
Tb09.142.0380 apidb|Tb09.142.0380 GI:70830730 GI:71743870 ATGCAAGCAAAAAATCGTAACTACAGCCATGATGCACATCCTGCACCACGAGGTGCAGTCTCGGTGGTTGACCAAGGAAGCACACAAGGGGCGAAAACCGTGAGCAAACGATCAGTCGATGAGGGAGGAAAGGAGATTTCGCAGCAGCAAGTGTCGGGGCAGTATGAAAGCTACGTAGCGTTGCCACTGCGAAATGGAATGTCCGAACATGAAGTGAGTAGACCTTCAGAAGTGGCCTTGGACGATGTGGGTGAACCCTCGTCCTTAAGTGAAAGTGTACCGAGGAGAAACGGTGCGAGTCGCAAAAGGTGTGCGATATTACTCTCCACAGGATTAAGTGTGGTGTTCTCCTGA hypothetical protein conserved Tb09.142.0380
Tb09.142.0400 apidb|Tb09.142.0400 GI:70830732 GI:71743874 ATGTTTGCACACGTAGAGGATCACACCGATGCTTTCCACCATCCCGAAAACCGACGGTTTCGCCGCTTTTCCTTCTCCCCCTGGCAGTCTGTTACTGTCCGACTGCCGCAATCCTTAAGACGGGATGCGCGCGAACATTTAATCTCCTCCCTCTCGAAGATGCACCGGATTCAGACATCGCAATGA hypothetical protein conserved Tb09.142.0400
Tb09.142.0410 apidb|Tb09.142.0410 GI:70830733 GI:71743876 ATGCGCCTCGTCACCGAATCTAGCGCCGGTGTTTCCCGCGCCTGTGAACTTTCGCCCATGGTGTCCACACCAAGTCGTTTCTCAACGATCCTTATTTCGCTGCATTTACAAGTTGCCGTTGGCTCTCTTTCCCACTCGACGTCATTACAACAATGGTTGAGTTCGGCTTTGGCATATAGCTTGTGTACAGCATCTCTTTTTTTGCTTATTTCTTCCGTGTGTCGAGAGAATGCTAGCGTCGGCATTGACGTTCCTGAACTCAGCAAGCTCCTGCGATCACTCACTTTCGTGAGTTCCATCAGCCGTAACTGTTGTGCTCTCGAGTTTGGCATCGTGCTTTCGCTCGCTTAG hypothetical protein Tb09.142.0410
Tb09.142.0430 apidb|Tb09.142.0430 GI:70830735 GI:71743880 ATGAATCATGGCATTGGTATGTGTGTTGCAATTCCCGCCATATTTTTTAAAACAATAATATGCACCATAGTTGTGTTGACTACTCATACATGTACGAGACTCTTCAATCTCTTTCATAAGGCAAATATTCAAAAGTGGACCGCAGTTTCACAAGTAGCACTTGCAGTTAAGAACTTCTCTTCCGAATTGATAAATAATAAAACCACTCCCATCATCTTTGCATGGAAGCGTCCGTTACCATCATGGCCACAGTTTCTACAACTCGCTACGTGCTCACTGGTTTTTTCTCTACAAAAATGCACATCCATTGTTGTGTCAGCTGTAGCGCATATGTGTGTGTGTGTGTCTGTGTGTGGTGAAATGGTTAAATCATTGGGTCGCATCGGGACCATATTGCATCATGACAAATATCATGCTACCATTTAA hypothetical protein Tb09.142.0430
Tb09.142.0440 apidb|Tb09.142.0440 GI:70830736 GI:71743882 ATGTGCTTTCCCAATTGTATTAATAATATGTTGTCAATGTTGTGTTCCATTGCAACTACTGCCGCTGCGCGTGTCAGCAGTGCTCTTCTCTTTATGGGATGTTCTATCATTACGTATGGTCGTTTCAGTATGGTATCACTTTTCCCCTTTGTGGTAATCGTTATGAACTTCTTCCCCTTTCCTCCCGAGGTTCCTCCCTATGACTTTTCTCACACTGGCAATATCCTTTTTCCAGTTGATAATTACGCATCGTGTGAGTCTGTCGGTATCGCTTTTGAATTTCTTTGGAAGGTTCCCTCCCAAAAAAATCCACTATTGAGGCTTGCTTGCCATGTGAGTGTGGTATAA hypothetical protein conserved Tb09.142.0440

Total number of rows: 8126

Table truncated, full table size 13585 Kbytes.




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Supplementary file Size Download File type/resource
GPL9285_080924_T_brucei_DS_EXP.ndf.gz 22.3 Mb (ftp)(http) NDF
GPL9285_080924_T_brucei_DS_EXP.ngd.gz 196.0 Kb (ftp)(http) NGD
GPL9285_full_array_layout_probe-level.txt.gz 4.0 Mb (ftp)(http) TXT

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