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Platform GPL9454 Query DataSets for GPL9454
Status Public on Feb 04, 2010
Title Affymetrix GeneChip Human Genome U133 Plus 2.0 Array [HGU133Plus2_Hs_ENST (v10) CDF]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Affymetrix
Manufacture protocol see manufacturer's web site
 
Description This is identical to GPL570 but a custom CDF environment was used to extract data. The custom chip definition file (CDF) was based on Ensembl transcript annotation (Hs133P_Hs_ENST_version10.CDF) rather than Affymetrix annotation (Dai et al., PMID: 16284200). The CDF can be found at the link below.
 
Submission date Oct 15, 2009
Last update date May 30, 2024
Contact name James Timmons
E-mail(s) jamie@augurprecisionmedicine.com, jamie.timmons@gmail.com
Organization name Augur Precision Medicine LTD
Street address Bridge of Allan
City Stirling
ZIP/Postal code FK9 4AX
Country United Kingdom
 
Samples (41) GSM462215, GSM462216, GSM462217, GSM462218, GSM462219, GSM462220 
Series (2)
GSE18583 Baseline skeletal muscle gene expression
GSE35661 A transcriptional map of the impact of endurance exercise training on skeletal muscle phenotype

Data table header descriptions
ID
SPOT_ID Ensembl transcript identifier

Data table
ID SPOT_ID
ENST00000000233_at ENST00000000233
ENST00000000412_at ENST00000000412
ENST00000000442_at ENST00000000442
ENST00000001008_at ENST00000001008
ENST00000002125_at ENST00000002125
ENST00000002165_at ENST00000002165
ENST00000002501_at ENST00000002501
ENST00000002829_at ENST00000002829
ENST00000003100_at ENST00000003100
ENST00000003302_at ENST00000003302
ENST00000003583_at ENST00000003583
ENST00000003607_at ENST00000003607
ENST00000003912_at ENST00000003912
ENST00000004531_at ENST00000004531
ENST00000004921_at ENST00000004921
ENST00000004980_at ENST00000004980
ENST00000004982_at ENST00000004982
ENST00000005082_at ENST00000005082
ENST00000005178_at ENST00000005178
ENST00000005198_at ENST00000005198

Total number of rows: 25710

Table truncated, full table size 878 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL9454_Hs133P_Hs_ENST_version10.CDF.gz 14.6 Mb (ftp)(http) CDF

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