NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE102385 Query DataSets for GSE102385
Status Public on Dec 06, 2017
Title The contribution of the post-transcriptional regulator CsrA to translation
Organism Escherichia coli str. K-12 substr. MG1655
Experiment type Expression profiling by high throughput sequencing
Other
Summary Analysis of the contribution of the post-transcriptional regulator CsrA to translation during exponential growth in Escherichia coli
 
Overall design 5 biological replicates of ribosome protected fragments and paired RNA samples from wild type and csrA::kan mutant strains were analyzed
 
Contributor(s) Potts AH, Romeo T
Citation(s) 29150605
Submission date Aug 08, 2017
Last update date May 15, 2019
Contact name Anastasia Haley Potts
E-mail(s) anastasi@ufl.edu
Organization name University of Florida
Department Department of Microbiology and Cell Science
Lab Dr. Tony Romeo
Street address 1355 Museum Drive, Bldg. 981
City Gainesville
State/province FL
ZIP/Postal code 32611
Country USA
 
Platforms (1)
GPL15010 Illumina HiSeq 2000 (Escherichia coli str. K-12 substr. MG1655)
Samples (20)
GSM2735889 RPF MG1655 1
GSM2735890 RPF MG1655 2
GSM2735891 RPF MG1655 3
This SubSeries is part of SuperSeries:
GSE102386 The contribution of the post-transcriptional regulator CsrA to RNA stability and translation and identification of binding partners
Relations
BioProject PRJNA397635
SRA SRP115158

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE102385_RibosomeProfilingcounts.csv.gz 150.6 Kb (ftp)(http) CSV
SRA Run SelectorHelp
Raw data are available in SRA
Processed data are available on Series record

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap