|
| Status |
Public on Aug 18, 2018 |
| Title |
Prediction of ribosomal elongation rate from ribosome profiling data |
| Organism |
Saccharomyces cerevisiae |
| Experiment type |
Expression profiling by high throughput sequencing
Other
|
| Summary |
We leverage a model statistical framework coupled with high resoluation ribosome profiling data to produce robust estimates of per-codon elongation rates in yeast.
|
| |
|
| Overall design |
Codon-level Ribosome Profiling Analysis
|
| |
|
| Contributor(s) |
Al-Husaini N, Hanson G, Sweet TJ, Coller J |
| Citation(s) |
29997263 |
| |
| Submission date |
Aug 18, 2017 |
| Last update date |
May 15, 2019 |
| Contact name |
Jeff Coller |
| E-mail(s) |
jmc71@case.edu
|
| Phone |
216-368-0299
|
| Organization name |
Case Western Reserve University School of Medicine
|
| Department |
Center for RNA Science and Therapeutics
|
| Lab |
Coller Lab
|
| Street address |
10900 Euclid Ave., Wood Bldg. W113
|
| City |
Cleveland |
| State/province |
Ohio |
| ZIP/Postal code |
44106 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL17342 |
Illumina HiSeq 2500 (Saccharomyces cerevisiae) |
|
| Samples (2) |
|
| Relations |
| BioProject |
PRJNA399079 |
| SRA |
SRP115846 |
