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Series GSE103544 Query DataSets for GSE103544
Status Public on Sep 15, 2017
Title Single-cell RNA-seq analysis of human CD14+ monocytes
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary We performed single-cell RNA-seq on CD14+ monocytes isolated from the blood of healthy donors. Using the 10x chromium technology, we analyzed 425 and 431 cells from 2 individual donors.
 
Overall design Peripheral Blood Mononuclear Cells (PBMC) were prepared by centrifugation on a Ficoll gradient. Blood CD14+ monocytes were isolated from healthy donors’ PBMC by positive selection using magnetic beads. Monocytes were 93-95% CD14+CD16- as assessed by flow cytometry. Cellular suspensions (1700 cells) were loaded on a 10X Chromium instrument (10X Genomics) according to manufacturer’s protocol.
 
Contributor(s) Segura E, Tang-Huau T, Bohec M, Gueguen P, Goudot C
Citation(s) 28930664
Submission date Sep 06, 2017
Last update date Jul 25, 2021
Contact name Elodie Segura
E-mail(s) elodie.segura@curie.fr
Phone +336156246720
Organization name Institut Curie
Department INSERM U932
Street address 26 rue d'Ulm
City Paris
ZIP/Postal code 75005
Country France
 
Platforms (1)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (2)
GSM2773408 donor 1 RNA-seq
GSM2773409 donor 2 RNA-seq
Relations
BioProject PRJNA401805
SRA SRP117082

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103544_RAW.tar 1.8 Mb (http)(custom) TAR (of CSV)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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