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Series GSE103843 Query DataSets for GSE103843
Status Public on Sep 05, 2018
Title Genome-wide profiling of siRNA targeting EWS-FLI1 in TC32 Ewing sarcoma cell line
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing
Summary Identification of genes and pathways that were influenced by knock-down EWS-FLI1 in TC32 Ewing sarcoma cell line.
 
Overall design TC32 Ewing sarcoma cell line were transfected with control siNeg or siRNA corresponding EWSR1 or FLI1 gene. Two samples in each group were analyzed.
 
Contributor(s) Nirmalya S, Kim S, Caplen N
Citation(s) 29873416
Submission date Sep 13, 2017
Last update date Jul 25, 2021
Contact name Suntae Kim
E-mail(s) kims23@mail.nih.gov
Phone 2407607393
Organization name CCR, NCI, NIH
Department Genetics Branch
Lab Gene Silencing Section
Street address Bldg 37, room 6128
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Platforms (1)
GPL11154 Illumina HiSeq 2000 (Homo sapiens)
Samples (6)
GSM2784363 TC32_siNeg_rep1
GSM2784364 TC32_siNeg_rep2
GSM2784365 TC32_siEWSR1_rep1
Relations
BioProject PRJNA407227
SRA SRP117628

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE103843_RAW.tar 4.5 Mb (http)(custom) TAR (of TXT)
SRA Run SelectorHelp
Raw data are available in SRA
Processed data provided as supplementary file

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