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| Status |
Public on Jan 21, 2019 |
| Title |
MS2-affinity purification coupled with RNA sequencing (MAPS) reveals SraL sRNA targetome in Salmonella Typhimurium |
| Organism |
Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344 |
| Experiment type |
Non-coding RNA profiling by high throughput sequencing
|
| Summary |
Recently, we developed an in vivo technology to draw the interacting map of a specific small regulatory RNA (sRNA). We called it MAPS for MS2-affinity purification coupled with RNA sequencing. In this study, we performed MAPS with SraL sRNA (Salmonella Typhimurium SL1344).
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| Overall design |
Identification of RNAs co-purified with MS2-SraL in a sraL- strain. SraL (without MS2) was used as control.
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| Contributor(s) |
Eyraud A, Lalaouna D, Massé E |
| Citation(s) |
30718400 |
| |
| Submission date |
Dec 18, 2017 |
| Last update date |
Apr 22, 2019 |
| Contact name |
Eric Massé |
| E-mail(s) |
eric.masse@usherbrooke.ca
|
| Organization name |
University of Sherbrooke
|
| Department |
Biochemistry
|
| Lab |
Eric Massé Laboratory
|
| Street address |
3201, Jean Mignault
|
| City |
SHERBROOKE |
| State/province |
Québec |
| ZIP/Postal code |
J1E 4K8 |
| Country |
Canada |
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| Platforms (1) |
| GPL22775 |
Illumina MiSeq (Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344) |
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| Samples (2) |
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| Relations |
| BioProject |
PRJNA422894 |
| SRA |
SRP126963 |
