|
| Status |
Public on Oct 15, 2018 |
| Title |
RNA-seq analysis of BAP1-depleted uveal melanoma cells |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by high throughput sequencing
|
| Summary |
OCM-1A uveal melanoma cells were infected with lentivirus carrying shRNA expression constructs specific for BAP1 or GFP (control), and placed under selection for 6 days. RNA-seq was performed.
|
| |
|
| Overall design |
Samples represent three independent experiments treated with control or BAP1 shRNA
|
| |
|
| Contributor(s) |
Onken MD, Yen M |
| Citation(s) |
30400891 |
| NIH grant(s) |
| Grant ID |
Grant title |
Affiliation |
Name |
| R01 GM038542 |
ACTIN AND MICROTUBULE-BASED MECHANISMS FOR FUNCTIONS OF NK LYMPHOID CELLS |
WASHINGTON UNIVERSITY |
JOHN A COOPER |
| R35 GM118171 |
ACTIN ASSEMBLY AND CELL MOTILITY: MECHANISMS AND REGULATION |
WASHINGTON UNIVERSITY |
JOHN A COOPER |
|
| |
| Submission date |
Feb 06, 2018 |
| Last update date |
Mar 27, 2019 |
| Contact name |
Michael D Onken |
| Organization name |
Washington University School of Medicine
|
| Department |
Biochemistry & Molecular Biophysics
|
| Lab |
Box 8231
|
| Street address |
660 S. Euclid Ave
|
| City |
Saint Louis |
| State/province |
MO |
| ZIP/Postal code |
63110 |
| Country |
USA |
| |
|
| Platforms (1) |
| GPL16791 |
Illumina HiSeq 2500 (Homo sapiens) |
|
| Samples (6)
|
|
| Relations |
| BioProject |
PRJNA433106 |
| SRA |
SRP132263 |
Less...
More...